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Comment: Comment: Oxford Nanopore Sequencing Output Related
1 day ago by samuel.a.odonnell ▴ 560
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498
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Comment: Comment: Eukaryotic genome Assembly
20 days ago by samuel.a.odonnell ▴ 560
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1
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253
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Comment: Comment: genome assembly for a pathogens
4 weeks ago by samuel.a.odonnell ▴ 560
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1
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576
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Comment: Comment: SPADES Result Comparison
4 weeks ago by samuel.a.odonnell ▴ 560
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285
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Comment: Comment: Mismatch between number of reads in fastq and mapped reads
7 weeks ago by samuel.a.odonnell ▴ 560
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605
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Comment: Comment: Best practices in Fungal Genome Assembly
8 weeks ago by samuel.a.odonnell ▴ 560
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1
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605
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Comment: Comment: Best practices in Fungal Genome Assembly
8 weeks ago by samuel.a.odonnell ▴ 560
1
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1
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605
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Comment: Comment: Best practices in Fungal Genome Assembly
8 weeks ago by samuel.a.odonnell ▴ 560
1
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0
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605
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Comment: Comment: Best practices in Fungal Genome Assembly
8 weeks ago by samuel.a.odonnell ▴ 560
1
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2
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1.1k
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Comment: Comment: Removing duplicates
3 months ago by samuel.a.odonnell ▴ 560
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1
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1.1k
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Comment: Comment: Removing duplicates
3 months ago by samuel.a.odonnell ▴ 560
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704
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Comment: Comment: Porechop demulitplexing of nanopore sequencing data and barcode bins for each sa
9 months ago by samuel.a.odonnell ▴ 560
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1.6k
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Comment: Comment: Short Read Data Genome Assembly
10 months ago by samuel.a.odonnell ▴ 560
1
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1
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1.3k
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Comment: Comment: The GATK "The given bam input has no sample names." error
11 months ago by samuel.a.odonnell ▴ 560
0
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0
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975
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Comment: Comment: investigate the inversions in comparison of assembled genome with reference geno
11 months ago by samuel.a.odonnell ▴ 560
0
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1
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975
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Comment: Comment: investigate the inversions in comparison of assembled genome with reference geno
11 months ago by samuel.a.odonnell ▴ 560
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1
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597
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Comment: Comment: Expect heterozygous variant from reads
12 months ago by samuel.a.odonnell ▴ 560
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0
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979
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Comment: Comment: vg: Mapping fewer reads to a genome graph than a linear reference
14 months ago by samuel.a.odonnell ▴ 560
1
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1
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2.1k
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Comment: Comment: How to rerun Guppy Basecalling (with both fast5_pass and fast5_fail)
15 months ago by samuel.a.odonnell ▴ 560
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1.1k
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Comment: Comment: MissAssembly Correction
17 months ago by samuel.a.odonnell ▴ 560
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1
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1.1k
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Comment: Comment: MissAssembly Correction
17 months ago by samuel.a.odonnell ▴ 560
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0
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599
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Answer: Answer: scaffold assembly inro chromosomal assembly using reference genome
18 months ago by samuel.a.odonnell ▴ 560
2
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1
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1.2k
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Comment: Comment: Problem with NextDenovo fungal assembly
18 months ago by samuel.a.odonnell ▴ 560
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496
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Comment: Comment: Tools for annotating predicted genes?
18 months ago by samuel.a.odonnell ▴ 560
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0
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1.6k
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Comment: Comment: minimap2, before or after assembly?
19 months ago by samuel.a.odonnell ▴ 560
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915
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Comment: Comment: Filtering mitochondrion reads from FastQ files
20 months ago by samuel.a.odonnell ▴ 560
1
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1.3k
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Comment: Comment: How to fix long read from ONT : ERROR: Invalid char while reading fastq.gz file
20 months ago by samuel.a.odonnell ▴ 560
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0
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1.6k
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Comment: Comment: Low basecalling of raw ONT data
21 months ago by samuel.a.odonnell ▴ 560
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0
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1.1k
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Comment: Comment: Assembly size is double the genome size despite specifying --genome-size in flye
21 months ago by samuel.a.odonnell ▴ 560
2
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1
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719
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Comment: Comment: Why SNPs with read depth > 100 or 200 were removed?
21 months ago by samuel.a.odonnell ▴ 560
2
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0
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954
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Comment: Comment: Help with geom_dotplot() script
22 months ago by samuel.a.odonnell ▴ 560
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0
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846
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Comment: Comment: How can I make a reference genome from multiple genomes?
22 months ago by samuel.a.odonnell ▴ 560
4
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1
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633
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assembly based phylogeny
whole-genome phylogenetics assembly
updated 22 months ago by ★ 1.2k • written 22 months ago by ▴ 560
2
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1
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930
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Answer: Answer: How do I input one fasta file for an entire reference genome?
23 months ago by samuel.a.odonnell ▴ 560
1
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1
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631
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Comment: Comment: Unexpected coverage across genome
23 months ago by samuel.a.odonnell ▴ 560
1
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0
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922
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Comment: Comment: ONT multiplexing not generating equal amount of data for each barcodes
23 months ago by samuel.a.odonnell ▴ 560
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0
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1.1k
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Comment: Comment: Convert fasta to Fastq/bam
23 months ago by samuel.a.odonnell ▴ 560
0
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0
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1.0k
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Comment: Comment: Variant calling for scaffold genome
2.2 years ago by samuel.a.odonnell ▴ 560
1
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1
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1.0k
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Comment: Comment: A question about SPAdes
2.2 years ago by samuel.a.odonnell ▴ 560
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1
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1.1k
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Comment: Comment: Method to fill N gaps with de novo assembly
2.2 years ago by samuel.a.odonnell ▴ 560
0
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0
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665
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Comment: Comment: comparing and aligning 2 de novo genomes
2.2 years ago by samuel.a.odonnell ▴ 560
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1
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665
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Comment: Comment: comparing and aligning 2 de novo genomes
2.2 years ago by samuel.a.odonnell ▴ 560
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0
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1.2k
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Comment: Comment: Incomplete TE identification by repeatmasker
2.2 years ago by samuel.a.odonnell ▴ 560
0
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1
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1.2k
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Comment: Comment: Incomplete TE identification by repeatmasker
2.2 years ago by samuel.a.odonnell ▴ 560
0
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1
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1.2k
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Comment: Comment: Incomplete TE identification by repeatmasker
2.2 years ago by samuel.a.odonnell ▴ 560
1
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0
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1.1k
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Answer: Answer: "moving average" function for "coverage" signal in bed files?
2.2 years ago by samuel.a.odonnell ▴ 560
0
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0
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663
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Comment: Comment: Correct de novo assembly workflow and mapping
2.2 years ago by samuel.a.odonnell ▴ 560
0
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1
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776
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Comment: Comment: Considering two and more variation in polyploidy
2.2 years ago by samuel.a.odonnell ▴ 560
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1
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776
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Comment: Comment: Considering two and more variation in polyploidy
2.2 years ago by samuel.a.odonnell ▴ 560
2
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1
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1.0k
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Comment: Comment: Why he/she disabled the base calling in Guppy?
2.3 years ago by samuel.a.odonnell ▴ 560
119 results • Page 1 of 3
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