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313
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Comment:
Comment: Parsing fasta file by coordinates
3 days ago by
shenwei356
8.4k
1
vote
1
reply
255
views
Comment:
Comment: Seqkit Replace
15 days ago by
shenwei356
8.4k
2
votes
1
reply
255
views
Answer:
Answer: Seqkit Replace
15 days ago by
shenwei356
8.4k
2
votes
1
reply
502
views
Comment:
Comment: Max lenght reads from fastq
23 days ago by
shenwei356
8.4k
0
votes
0
replies
174
views
Comment:
Comment: Conda appears different than yesterday
8 weeks ago by
shenwei356
8.4k
0
votes
0
replies
459
views
Comment:
Comment: Blastn for all bacteria genomes; create the db
8 weeks ago by
shenwei356
8.4k
0
votes
1
reply
459
views
Answer:
Answer: Blastn for all bacteria genomes; create the db
8 weeks ago by
shenwei356
8.4k
7
votes
5
replies
4.7k
views
How to get consensus FASTA sequence from GFA assembly graph?
gfa
consensus
updated 9 weeks ago by
Adam Taranto
▴ 40 • written 5.3 years ago by
shenwei356
8.4k
0
votes
0
replies
174
views
Comment:
Comment: Calculating percentage of reads mapped to a reference genome
11 weeks ago by
shenwei356
8.4k
3
votes
1
reply
666
views
Answer:
Answer: Renaming fasta files with their headers
3 months ago by
shenwei356
8.4k
0
votes
1
reply
430
views
Comment:
Comment: Species coverage in the NCBI protein NR database ?
4 months ago by
shenwei356
8.4k
0
votes
0
replies
430
views
Comment:
Comment: Species coverage in the NCBI protein NR database ?
4 months ago by
shenwei356
8.4k
5
votes
0
replies
519
views
Answer:
Answer: how to sort fasta file accroding to header
4 months ago by
shenwei356
8.4k
0
votes
1
reply
1.8k
views
Comment:
Comment: How to limit fasta header to 40 characters?
6 months ago by
shenwei356
8.4k
13
votes
6
replies
5.1k
views
Tool:
csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
CSV
Golang
TSV
7 months ago by
shenwei356
8.4k
1
vote
0
replies
5.1k
views
Answer:
Answer: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
7 months ago by
shenwei356
8.4k
0
votes
0
replies
24k
views
Comment:
Comment: searching reads with a certain sequence in fastq file
8 months ago by
shenwei356
8.4k
0
votes
1
reply
492
views
Answer:
Answer: Question about sequence alignment
8 months ago by
shenwei356
8.4k
3
votes
0
replies
772
views
Answer:
Answer: How to extract sequences from multiple fastq files based on a certain sequence
9 months ago by
shenwei356
8.4k
2
votes
0
replies
921
views
Answer:
Answer: Bash solution to replace part of FASTA headers witch contain matching values in
9 months ago by
shenwei356
8.4k
1
vote
0
replies
1.7k
views
Answer:
Answer: Getting sequences from fastq file using Grep command
9 months ago by
shenwei356
8.4k
2
votes
0
replies
650
views
Answer:
Answer: how to sort unique seq from fasta files
9 months ago by
shenwei356
8.4k
0
votes
1
reply
14k
views
Comment:
Comment: How to concatenate multiple fasta file
10 months ago by
shenwei356
8.4k
2
votes
1
reply
972
views
Comment:
Comment: how to use nohup with parallel
10 months ago by
shenwei356
8.4k
0
votes
1
reply
876
views
Answer:
Answer: Add a genome to a kraken library
10 months ago by
shenwei356
8.4k
2
votes
0
replies
473
views
Answer:
Answer: Randomly reduce size of reads but preserving the distribution
11 months ago by
shenwei356
8.4k
4
votes
1
reply
1.5k
views
Answer:
Answer: Compare two very close genomes (.fasta)
11 months ago by
shenwei356
8.4k
1
vote
1
reply
624
views
Answer:
Answer: How to identify Gap location
11 months ago by
shenwei356
8.4k
2
votes
0
replies
399
views
Answer:
Answer: I need a tool that allows me to see a whole genome and point out previously anno
11 months ago by
shenwei356
8.4k
2
votes
0
replies
961
views
Answer:
Answer: how to rename or time bunch of file names in fasta file
12 months ago by
shenwei356
8.4k
0
votes
1
reply
485
views
Answer:
Answer: genome annotation [sstart] [send] - how to get protein sequence from gene
12 months ago by
shenwei356
8.4k
1
vote
0
replies
1.8k
views
Comment:
Comment: Editting fasta headers
12 months ago by
shenwei356
8.4k
1
vote
0
replies
1.8k
views
Comment:
Comment: Editting fasta headers
12 months ago by
shenwei356
8.4k
2
votes
0
replies
1.4k
views
Comment:
Comment: split fasta file to train deep learning model
12 months ago by
shenwei356
8.4k
3
votes
1
reply
1.4k
views
Comment:
Comment: split fasta file to train deep learning model
12 months ago by
shenwei356
8.4k
6
votes
0
replies
1.4k
views
Answer:
Answer: how to edit fasta header
12 months ago by
shenwei356
8.4k
0
votes
0
replies
1.1k
views
Answer:
Answer: command line - how to change name of multiple files at the same time
13 months ago by
shenwei356
8.4k
0
votes
0
replies
1.8k
views
Comment:
Comment: batch renaming FASTQ files
13 months ago by
shenwei356
8.4k
2
votes
0
replies
607
views
Comment:
Comment: 30 bp sequence that does not show hit within a genome
14 months ago by
shenwei356
8.4k
2
votes
0
replies
564
views
Answer:
Answer: bash/awk code to comapre tables
15 months ago by
shenwei356
8.4k
1
vote
0
replies
1.3k
views
Comment:
Comment: retrieve amplicon sequences from fna file
15 months ago by
shenwei356
8.4k
1
vote
1
reply
1.6k
views
Comment:
Comment: How to determine the encoding method of quality score in a fastaq file?
15 months ago by
shenwei356
8.4k
1
vote
1
reply
630
views
Answer:
Answer: How to reduce RNA_from_genomic file to just gene name and sequence
17 months ago by
shenwei356
8.4k
2
votes
0
replies
1.2k
views
Answer:
Answer: How to add column name to each cell using bash?
17 months ago by
shenwei356
8.4k
3
votes
1
reply
2.1k
views
Answer:
Answer: fasta extract using seqkit grep regex pattern
17 months ago by
shenwei356
8.4k
0
votes
1
reply
1.8k
views
Comment:
Comment: Renaming sequencing libraries
17 months ago by
shenwei356
8.4k
1
vote
1
reply
1.8k
views
Comment:
Comment: Renaming sequencing libraries
17 months ago by
shenwei356
8.4k
3
votes
2
replies
1.8k
views
Answer:
Answer: Renaming sequencing libraries
17 months ago by
shenwei356
8.4k
2
votes
0
replies
854
views
Answer:
Answer: Mutate genomes in silico
17 months ago by
shenwei356
8.4k
0
votes
1
reply
573
views
Comment:
Comment: renaming files and including folder/directory name in it
18 months ago by
shenwei356
8.4k
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