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5
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0
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6.8k
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Answer: Answer: How to make a summary plot like below?
3.0 years ago by MatthewP ★ 1.4k
0
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0
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667
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Answer: Answer: RNA-seq different reads numbers of two samples is trouble?
3.0 years ago by MatthewP ★ 1.4k
1
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0
replies
1.2k
views
Comment: Comment: quick way of contamination identification from fastq file
3.0 years ago by MatthewP ★ 1.4k
0
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1
reply
898
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Comment: Comment: Normalisation of RNA-seq data for coexpression analysis
3.0 years ago by MatthewP ★ 1.4k
1
vote
4
replies
3.0k
views
How to determine gender by homozygosity (rate?) in X chromosome?
chromosome-X plink snp
updated 17 months ago by 43k • written 5.1 years ago by ★ 1.4k
0
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0
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719
views
Comment: Comment: Troubleshooting: rRNA depletion RNAseq no DE genes
3.1 years ago by MatthewP ★ 1.4k
0
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0
replies
2.8k
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Comment: Answer: Installing SRAToolKit
3.1 years ago by MatthewP ★ 1.4k
0
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0
replies
5.6k
views
Comment: Comment: How to do Disease-Free survival analysis with TCGA data ??
3.2 years ago by MatthewP ★ 1.4k
1
vote
1
reply
1.2k
views
VEP custom annotation didn't add INFO field
vep vcf
updated 3.2 years ago by 23k • written 3.2 years ago by ★ 1.4k
0
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0
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1.7k
views
Comment: C: Downloading 1000genome phase 3 data in 38 build
3.2 years ago by MatthewP ★ 1.4k
0
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0
replies
1.3k
views
pathview graphviz plot problem.
pathview kegg
3.2 years ago by MatthewP ★ 1.4k
0
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0
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2.1k
views
Answer: A: What is KEGG BRITE ?
3.2 years ago by MatthewP ★ 1.4k
0
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1
reply
901
views
Comment: C: About shell script
3.3 years ago by MatthewP ★ 1.4k
1
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0
replies
2.1k
views
Answer: A: Get top-contribution variant name for PCA result
3.3 years ago by MatthewP ★ 1.4k
2
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1
reply
778
views
Answer: A: question about R language 'for' loop
3.3 years ago by MatthewP ★ 1.4k
0
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0
replies
2.9k
views
Comment: C: Bowtie2 command does not produce output file
3.3 years ago by MatthewP ★ 1.4k
7
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1
reply
5.8k
views
Answer: Answer: How to create interval list from reference fasta or dict file?
2.9 years ago by MatthewP ★ 1.4k
1
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0
replies
5.8k
views
Comment: C: How to create interval list from reference fasta or dict file?
3.3 years ago by MatthewP ★ 1.4k
1
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0
replies
5.8k
views
Comment: C: How to create interval list from reference fasta or dict file?
3.3 years ago by MatthewP ★ 1.4k
0
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1
reply
944
views
Comment: C: How to get gene level of differential expression from 2 color channel array with
3.3 years ago by MatthewP ★ 1.4k
0
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1
reply
944
views
Comment: C: How to get gene level of differential expression from 2 color channel array with
3.3 years ago by MatthewP ★ 1.4k
1
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1
reply
2.9k
views
Comment: C: About GATK4 Mutect2 runtime (Whole Exome seq)
3.3 years ago by MatthewP ★ 1.4k
0
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1
reply
566
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Answer: A: How to combine my fq file based on sample
3.3 years ago by MatthewP ★ 1.4k
1
vote
5
replies
944
views
How to get gene level of differential expression from 2 color channel array with limma?
limma microarray
updated 3.3 years ago by ★ 7.2k • written 3.3 years ago by ★ 1.4k
0
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1
reply
1.2k
views
Comment: C: How to analysis 2 color microarray data from GEO with limma?
3.3 years ago by MatthewP ★ 1.4k
4
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3
replies
1.2k
views
How to analysis 2 color microarray data from GEO with limma?
limma
updated 3.3 years ago by ★ 7.2k • written 3.4 years ago by ★ 1.4k
0
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0
replies
1.4k
views
Comment: C: SNPs in Promoter region
3.3 years ago by MatthewP ★ 1.4k
0
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1
reply
876
views
Comment: C: Question - RealignerTargetCreator : incompatible contigs
3.4 years ago by MatthewP ★ 1.4k
0
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0
replies
1.6k
views
Comment: C: GATK read groups for instruments from BGI Tech like BGISEQ-500?
3.4 years ago by MatthewP ★ 1.4k
2
votes
4
replies
1.6k
views
GATK read groups for instruments from BGI Tech like BGISEQ-500?
GATK
updated 3.4 years ago by ★ 1.2k • written 3.4 years ago by ★ 1.4k
2
votes
1
reply
2.7k
views
Better place to download dbSNP than official ftp site?
dbSNP
3.4 years ago by MatthewP ★ 1.4k
0
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0
replies
3.2k
views
Comment: C: How to create PCA plot with TPM data
3.4 years ago by MatthewP ★ 1.4k
3
votes
0
replies
1.6k
views
Comment: C: Very large fastq files from RNA-seq
3.5 years ago by MatthewP ★ 1.4k
0
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0
replies
1.8k
views
How to scale data before fitting cox model?
cox survival
updated 3.5 years ago by 20 • written 3.7 years ago by ★ 1.4k
0
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0
replies
1.9k
views
Answer: C: bedtools sort and merge
3.5 years ago by MatthewP ★ 1.4k
1
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0
replies
2.2k
views
Comment: C: Conditional clustering arguments in R (complexheatmap)
3.5 years ago by MatthewP ★ 1.4k
0
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1
reply
2.2k
views
Comment: C: Conditional clustering arguments in R (complexheatmap)
3.5 years ago by MatthewP ★ 1.4k
0
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1
reply
2.7k
views
Comment: C: Genrich analyse ATAC-seq data problem
3.6 years ago by MatthewP ★ 1.4k
0
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1
reply
2.7k
views
Comment: C: Genrich analyse ATAC-seq data problem
3.6 years ago by MatthewP ★ 1.4k
0
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5
replies
2.7k
views
Genrich analyse ATAC-seq data problem
Genrich ATAC-seq
3.6 years ago by MatthewP ★ 1.4k
2
votes
1
reply
2.4k
views
Comment: C: Customize fold change legend values in ComplexHeatmap
3.6 years ago by MatthewP ★ 1.4k
0
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1
reply
1.5k
views
Comment: C: Access metadata in GEO expression datasets
3.6 years ago by MatthewP ★ 1.4k
0
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1
reply
2.7k
views
Comment: C: Help with Rstudio in Anaconda Navigator
3.6 years ago by MatthewP ★ 1.4k
0
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2
replies
1.9k
views
Comment: C: key lookup changes with AnnotationDbi version
3.6 years ago by MatthewP ★ 1.4k
0
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0
replies
890
views
Comment: C: DESeq2 Shrink cutoff
3.6 years ago by MatthewP ★ 1.4k
0
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1
reply
1.9k
views
Comment: C: key lookup changes with AnnotationDbi version
3.6 years ago by MatthewP ★ 1.4k
4
votes
1
reply
644
views
ATAC-seq many reads first base is "N"
atac-seq
3.6 years ago by MatthewP ★ 1.4k
1
vote
1
reply
689
views
Answer: A: paired reads aligned at the same genomic position
3.6 years ago by MatthewP ★ 1.4k
1
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1
reply
4.0k
views
Comment: A: Bowtie2 alignment help for ATAC-seq
3.6 years ago by MatthewP ★ 1.4k
0
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1
reply
5.2k
views
Comment: C: HISAT2- (ERR): hisat2-align exited with value 134
3.6 years ago by MatthewP ★ 1.4k
274 results • Page 2 of 6
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