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Answer: Answer: Using TCGABioLinks to query multiple cancer studies
updated 12 months ago by 154k • written 12 months ago by 12k
4
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1
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12k
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Answer: Answer: How To Extract Spliced Rnaseq Reads
updated 2.9 years ago by 45k • written 11.9 years ago by 12k
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1
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3.0k
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Comment: C: [Samtools] How many hours does it take to call SNPs and indels?
updated 5.8 years ago by 45k • written 11.4 years ago by 12k
4
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9.7k
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Answer: A: Difference between RNA-sq and Transcriptome
updated 5.8 years ago by 45k • written 11.4 years ago by 12k
1
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1
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6.7k
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Answer: A: bowtie1 -m --best --strata options
updated 5.8 years ago by 45k • written 11.4 years ago by 12k
3
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8.7k
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Answer: A: Why is DNA split into many fragments before being sequenced by an Illumina seque
updated 5.8 years ago by 45k • written 11.4 years ago by 12k
2
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0
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14k
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Answer: A: finding mutations in RNA-Seq data
updated 5.9 years ago by 45k • written 11.4 years ago by 12k
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1
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3.8k
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Comment: C: csfasta malformed qualities
updated 5.9 years ago by 45k • written 11.4 years ago by 12k
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1
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3.1k
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Comment: C: Increase percentage of reads needed to call a SNP in Unified Genotyper
updated 5.9 years ago by 45k • written 11.4 years ago by 12k
1
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1
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14k
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Comment: C: samtools idxstats on indexed BAM failed
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
10
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2
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38k
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Answer: A: Estimating Insert Size From Paired End Data.
updated 5.9 years ago by 45k • written 11.7 years ago by 12k
2
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0
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2.5k
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Answer: A: Are variable lengths are a problem for tophat2?
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
7
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11k
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Answer: A: How Coverage percentage is calculated in NGS data
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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0
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4.3k
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Comment: C: How to compute average depth of coverage for expression matrix
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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1
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5.2k
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Answer: A: how transfer a vcf-file to fasta-format
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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7.9k
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Comment: C: What is ref sequence name in BAM file header ?
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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1
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4.3k
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Answer: A: Detecting Variants near repeats
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
1
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0
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6.2k
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Answer: A: How to find out codon changes in non-synonymous and synonymous SNPs
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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0
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7.8k
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Comment: C: How To Query The Human Chipseq Data (Encode) For A Transcription Factor Binding
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
0
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0
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38k
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Comment: C: Compare 2 VCF files
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
1
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1
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5.8k
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Comment: C: sed newbie question: removing a specific letter in a word from fasta heading usi
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
1
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1
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5.8k
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Comment: C: sed newbie question: removing a specific letter in a word from fasta heading usi
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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1
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7.4k
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Comment: C: Is the source code for the NCBI-BLAST service available anywhere?
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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0
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7.1k
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Comment: C: EMBOSS Needle: Read sequences from stdin
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
2
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1
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7.1k
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Answer: A: EMBOSS Needle: Read sequences from stdin
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
1
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0
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5.9k
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Comment: C: NGS pipeline analyses
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
4
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0
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5.2k
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Answer: A: what is the properties of filtering the vcf files
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
5
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0
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5.9k
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Answer: A: NGS pipeline analyses
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
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0
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11k
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Comment: C: TopHat paramertes " -G/--GTF <GTF/GFF3 file>
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
1
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1
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11k
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Answer: A: TopHat paramertes " -G/--GTF <GTF/GFF3 file>
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
0
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0
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40k
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Comment: C: GTF annotation file for Human
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
10
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2
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40k
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Answer: A: GTF annotation file for Human
updated 5.9 years ago by 45k • written 11.5 years ago by 12k
2
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0
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2.4k
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Answer: A: Cuffldiff is almost done, but it seems to be hanging at "99% complete"
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
0
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0
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3.3k
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Comment: C: samtools + map
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
0
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0
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12k
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Comment: C: Paired-End Reads Alignment For Variant Calling ?
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
0
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0
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3.7k
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Answer: A: functional analysis of intronic and neargene SNPs
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
4
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1
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10k
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Comment: C: How to start Bioinformatics ?
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
1
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0
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17k
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Answer: A: What is GFF3 and how to extract genomic sequences from it?
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
4
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1
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8.2k
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Answer: A: miRNA alignment to the genome
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
5
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0
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5.4k
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Answer: A: How to find the differences between filtered and unfiltered VCF files
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
1
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0
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4.9k
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Comment: C: Reads mapped to another chromosome in paired-end data of RNA-seq
updated 5.9 years ago by 45k • written 11.4 years ago by 12k
4
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0
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7.4k
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Answer: A: In Rna-Seq Data, How To Separate Intronic, Exonic, Non-Coding, Snornas ?
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
12
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2
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25k
views
Answer: A: Filtration Of Reads With Length Lower Than 30 From Bam
updated 5.9 years ago by 45k • written 11.8 years ago by 12k
2
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0
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9.7k
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Comment: C: How To Write A Perl Script To Parse Fastq Files
updated 5.9 years ago by 45k • written 12.1 years ago by 12k
0
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1
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4.6k
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Comment: C: Exome Sequencing Alignment Question
updated 5.9 years ago by 45k • written 12.1 years ago by 12k
4
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2
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11k
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Answer: A: Substituting Snps On Reference Genome Assemblies
updated 5.9 years ago by 45k • written 12.5 years ago by 12k
0
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1
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4.5k
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Comment: C: A Question About Samtools And Calculating Depth
updated 5.9 years ago by 45k • written 12.6 years ago by 12k
3
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0
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6.8k
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Answer: A: Compare Vcf Files
updated 5.9 years ago by 45k • written 12.8 years ago by 12k
2
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0
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6.1k
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Answer: C: Replace vcf in-house variant IDs with dnSNP variant IDs
updated 5.9 years ago by 45k • written 10.1 years ago by 12k
4
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1
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6.4k
views
Comment: C: Log transformation of RPKM data for PCA analysis
updated 6.0 years ago by 45k • written 10.1 years ago by 12k
1,162 results • Page 1 of 24
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