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Illumina FASTQ FILTERING
NGS Genomics
updated 2.4 years ago by 45k • written 2.5 years ago by ▴ 100
1
vote
1
reply
1.8k
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Comment: C: DESeqDataSetFromHTSeqCount function taking long time and utilizing more RAM
updated 4.9 years ago by 45k • written 5.1 years ago by ▴ 100
5
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6
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1.8k
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DESeqDataSetFromHTSeqCount function taking long time and utilizing more RAM
DESeq2 R RNA-Seq
updated 23 months ago by 45k • written 5.1 years ago by ▴ 100
0
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1
reply
1.4k
views
Issue with Duplicates reads in Exom Data
sequencing alignment duplicates BAM
updated 5.0 years ago by 21k • written 5.0 years ago by ▴ 100
0
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0
replies
3.6k
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Comment: C: Issues with adding gene name and entrez ID to DESeq2 result having Ensembl ID.
5.0 years ago by Ranan Jyoti Sarma ▴ 100
0
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1
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3.6k
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Comment: C: Issues with adding gene name and entrez ID to DESeq2 result having Ensembl ID.
5.0 years ago by Ranan Jyoti Sarma ▴ 100
6
votes
7
replies
3.6k
views
Issues with adding gene name and entrez ID to DESeq2 result having Ensembl ID.
RNA-Seq DESeq2 ensembl
updated 5.0 years ago by 89k • written 5.0 years ago by ▴ 100
0
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1
reply
1.8k
views
Comment: C: DESeqDataSetFromHTSeqCount function taking long time and utilizing more RAM
5.1 years ago by Ranan Jyoti Sarma ▴ 100
0
votes
1
reply
4.5k
views
Comment: A: Reduce label size in Volcano Plot
5.7 years ago by Ranan Jyoti Sarma ▴ 100
5
votes
4
replies
4.5k
views
Reduce label size in Volcano Plot
RNA-Seq R volcano plot
5.7 years ago by Ranan Jyoti Sarma ▴ 100
0
votes
1
reply
699
views
Clustering of Differentilly expressed gene of Cuffdiff
RNA-Seq Genomics
5.7 years ago by Ranan Jyoti Sarma ▴ 100
3
votes
2
replies
3.7k
views
STAR-Fusion: Problem in interpreting
RNA-Seq
updated 22 months ago by ▴ 90 • written 5.8 years ago by ▴ 100
0
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0
replies
3.4k
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Comment: C: STAR genome generate taking long time and less thread.
5.8 years ago by Ranan Jyoti Sarma ▴ 100
0
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0
replies
3.4k
views
Comment: C: STAR genome generate taking long time and less thread.
5.8 years ago by Ranan Jyoti Sarma ▴ 100
3
votes
5
replies
3.4k
views
STAR genome generate taking long time and less thread.
RNA-Seq STAR
updated 23 months ago by 45k • written 5.8 years ago by ▴ 100
1
vote
3
replies
963
views
problem in creating ranked list for GSEApreranked gene enrichment
RNA-Seq rna-seq
updated 6.0 years ago by • 0 • written 6.0 years ago by ▴ 100
0
votes
1
reply
2.8k
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Comment: C: VisualMSI for MSI Calculation using NGS/WXS
6.0 years ago by Ranan Jyoti Sarma ▴ 100
1
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0
replies
8.2k
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Comment: C: Which genome files to use for STAR?
6.0 years ago by Ranan Jyoti Sarma ▴ 100
0
votes
0
replies
1.5k
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Comment: C: DE analysis of genes with different number of samples in Tumor and control group
6.0 years ago by Ranan Jyoti Sarma ▴ 100
1
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1
reply
2.8k
views
Comment: C: VisualMSI for MSI Calculation using NGS/WXS
6.0 years ago by Ranan Jyoti Sarma ▴ 100
0
votes
1
reply
2.8k
views
Comment: C: VisualMSI for MSI Calculation using NGS/WXS
6.0 years ago by Ranan Jyoti Sarma ▴ 100
0
votes
0
replies
2.8k
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Comment: C: VisualMSI for MSI Calculation using NGS/WXS
6.0 years ago by Ranan Jyoti Sarma ▴ 100
1
vote
0
replies
8.0k
views
Answer: A: very confused with GC bias
6.0 years ago by Ranan Jyoti Sarma ▴ 100
0
votes
1
reply
2.8k
views
Comment: C: VisualMSI for MSI Calculation using NGS/WXS
6.0 years ago by Ranan Jyoti Sarma ▴ 100
1
vote
2
replies
2.8k
views
Answer: A: VisualMSI for MSI Calculation using NGS/WXS
6.0 years ago by Ranan Jyoti Sarma ▴ 100
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