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184
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Tutorial:
Making Tile plots to show Synonymous Non-Synonymous mutation fraction
mutation
ggplotify
geom_tile
ggplot2
9 days ago by
rohitsatyam102
▴ 780
0
votes
0
replies
254
views
Tutorial:
Using easyPubMed and scholar package to get all citations of your paper
scholar
easyPubMed
4 weeks ago by
rohitsatyam102
▴ 780
0
votes
1
reply
374
views
Comment:
Comment: X-axis order changes in Mirrored Stacked Bar Plot
5 weeks ago by
rohitsatyam102
▴ 780
0
votes
4
replies
374
views
X-axis order changes in Mirrored Stacked Bar Plot
ggplot2
updated 5 weeks ago by
Basti
★ 1.9k • written 6 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
949
views
Comment:
Comment: Computing Tajima's D from haploid SNPs
6 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
3.3k
views
Comment:
Comment: dN/dS ratio from .vcf file
6 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
2.1k
views
Comment:
Comment: Use vcf files for dN/dS calculations
6 weeks ago by
rohitsatyam102
▴ 780
0
votes
1
reply
2.1k
views
Comment:
Comment: Use vcf files for dN/dS calculations
6 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
82k
views
Comment:
Comment: Selecting Random Pairs From Fastq?
10 weeks ago by
rohitsatyam102
▴ 780
0
votes
1
reply
308
views
Choosing background for ORA using scrnaseq
scRNA-seq
RNA-seq
ORA
updated 12 weeks ago by
Ram
41k • written 12 weeks ago by
rohitsatyam102
▴ 780
2
votes
1
reply
295
views
Producing Bulk samples from 10X data
rnaseq
scrnaseq
deseq2
bulk
seurat
updated 12 weeks ago by
ATpoint
78k • written 12 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
559
views
Comment:
Comment: Perform Primer to Primer comparison to see and show if the primers produced are
12 weeks ago by
rohitsatyam102
▴ 780
1
vote
2
replies
559
views
Blog:
Perform Primer to Primer comparison to see and show if the primers produced are new or 100% similar to published primers
Primers
emboss
needle
12 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
741
views
Comment:
Comment: CellRanger output more cells than specified using --force-cells? Why?
12 weeks ago by
rohitsatyam102
▴ 780
0
votes
1
reply
741
views
Comment:
Comment: CellRanger output more cells than specified using --force-cells? Why?
3 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
741
views
Comment:
Comment: CellRanger output more cells than specified using --force-cells? Why?
3 months ago by
rohitsatyam102
▴ 780
1
vote
5
replies
741
views
CellRanger output more cells than specified using --force-cells? Why?
scRNA-seq
cellranger
12 weeks ago by
rohitsatyam102
▴ 780
0
votes
0
replies
905
views
Comment:
Comment: Shannon's Entropy by Sliding Window in R
6 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.3k
views
Comment:
Comment: IQ-TREE stuck in selecting a substitution model with ModelFinder
6 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
1.3k
views
Comment:
Comment: IQ-TREE stuck in selecting a substitution model with ModelFinder
6 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.7k
views
Comment:
Comment: Extract sequence subset from multiple sequence alignment based on position in a
6 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.9k
views
Comment:
Comment: CNVKit for unmatched tumor-only WGS samples
8 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
623
views
Comment:
Comment: driver genes per sample or per group?
9 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
386
views
bcftools unable to tag poor variant calls properly
bcftools
gatk
vafator
updated 5 months ago by
Ram
41k • written 9 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
2.8k
views
Comment:
Comment: Where is the documentation for PacBio tool bam2fastx?
9 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
866
views
Comment:
Comment: Tool to combine Germline Variant call from different variant callers
9 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
8.6k
views
Comment:
Comment: Picard Exception: Illegal Mate State
9 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
866
views
Comment:
Comment: Tool to combine Germline Variant call from different variant callers
9 months ago by
rohitsatyam102
▴ 780
0
votes
3
replies
866
views
Tool to combine Germline Variant call from different variant callers
haplotypecaller
gatk
snps
9 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
13k
views
Comment:
Comment: How to filter/view reads mapped to multiple locations using samtools or pysam
10 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
309
views
Queries regarding SARS-CoV2 GISAID Genomes Submission
wf-artic
COVID
GISAID
12 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.3k
views
Comment:
Comment: how to pass trimmed fastP output to bwa in Nextflow
13 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.3k
views
Comment:
Comment: how to pass trimmed fastP output to bwa in Nextflow
13 months ago by
rohitsatyam102
▴ 780
5
votes
5
replies
1.3k
views
how to pass trimmed fastP output to bwa in Nextflow
fastp
bwa
nextflow
13 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
1.3k
views
Comment:
Comment: how to pass trimmed fastP output to bwa in Nextflow
13 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.7k
views
Comment:
Comment: bcl2fastq dumps most of the reads as undetermined
13 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
1.7k
views
Comment:
Comment: bcl2fastq dumps most of the reads as undetermined
13 months ago by
rohitsatyam102
▴ 780
0
votes
4
replies
902
views
convert a list of plotly plots to an HTML output
ggplot2
bam
plotly
coverage
updated 13 months ago by
swbarnes2
13k • written 13 months ago by
rohitsatyam102
▴ 780
4
votes
4
replies
1.7k
views
bcl2fastq dumps most of the reads as undetermined
bcl2fastq
13 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
902
views
Comment:
Comment: convert a list of plotly plots to an HTML output
13 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
2.5k
views
Comment:
Comment: reduce space between X-axis ticks
13 months ago by
rohitsatyam102
▴ 780
2
votes
6
replies
2.5k
views
reduce space between X-axis ticks
R
GSEA
13 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
2.5k
views
Comment:
Comment: reduce space between X-axis ticks
13 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
2.5k
views
Comment:
Comment: reduce space between X-axis ticks
13 months ago by
rohitsatyam102
▴ 780
1
vote
0
replies
711
views
Tutorial:
Making LDA Score plot
LDA
metagenomics
14 months ago by
rohitsatyam102
▴ 780
0
votes
1
reply
17k
views
Comment:
Comment: RNA-Seq analysis using STAR and Salmon
14 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
304
views
Make parts of process run once and other parts as loop
nextflow
sars
nextclade
covid
15 months ago by
rohitsatyam102
▴ 780
0
votes
0
replies
770
views
Comment:
Comment: Nextflow printing help message even when params.help is false
15 months ago by
rohitsatyam102
▴ 780
6
votes
2
replies
770
views
Nextflow printing help message even when params.help is false
nextflow
align
bwa
alignment
15 months ago by
rohitsatyam102
▴ 780
0
votes
6
replies
1.1k
views
Nextflow runs Successfully but output files are empty. How to debug?
nextflow
bcftools
16 months ago by
rohitsatyam102
▴ 780
211 results • Page
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