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Answer: Answer: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
22 months ago by MohammadAlkadi ▴ 70
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927
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After merging batches, I got very segmented umap in scanpy
scanpy single-cell
22 months ago by MohammadAlkadi ▴ 70
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927
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Answer: Answer: After merging batches, I got very segmented umap in scanpy
22 months ago by MohammadAlkadi ▴ 70
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4
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2.2k
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How to do typing of VDJ regions for10x TCR kit?
TCRA Immunology TCR
updated 2.7 years ago by ▴ 60 • written 3.2 years ago by ▴ 70
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781
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Answer: Answer: 10X genomics single cell
3.2 years ago by MohammadAlkadi ▴ 70
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Comment: Comment: How to do typing of VDJ regions for10x TCR kit?
3.2 years ago by MohammadAlkadi ▴ 70
2
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1
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2.9k
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Answer: Answer: Why fasterq-dump --split-3 give me only one file for paired-end SRA accession?
3.3 years ago by MohammadAlkadi ▴ 70
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908
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Comment: Comment: blastn command line won't find genes in large database
3.6 years ago by MohammadAlkadi ▴ 70
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2
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908
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blastn command line won't find genes in large database
blast
3.6 years ago by MohammadAlkadi ▴ 70
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1.5k
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Comment: Comment: How to get DEGs compare one sample to another?
3.9 years ago by MohammadAlkadi ▴ 70
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1.7k
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Comment: Comment: STAR aligner fatal error
4.4 years ago by MohammadAlkadi ▴ 70
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1.4k
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Comment: Comment: Help! Master regulator prediction from DEGs in RNA-seq
4.4 years ago by MohammadAlkadi ▴ 70
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1
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1.4k
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Comment: Comment: Help! Master regulator prediction from DEGs in RNA-seq
4.4 years ago by MohammadAlkadi ▴ 70
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1.4k
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Answer: Answer: Combine full-length and 3` RNAseq, is it possible?
4.4 years ago by MohammadAlkadi ▴ 70
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1.8k
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Comment: Comment: RSEM Calculate Expression Error
4.4 years ago by MohammadAlkadi ▴ 70
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1.1k
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Answer: Answer: Warning message: 'channel' automatically added to varMetadata in phenoData.
4.4 years ago by MohammadAlkadi ▴ 70
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1.8k
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Answer: Answer: RSEM Calculate Expression Error
4.5 years ago by MohammadAlkadi ▴ 70
2
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1
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19k
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Answer: A: How to trim Nanopore reads. Please suggest a tool.
4.6 years ago by MohammadAlkadi ▴ 70
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3.8k
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Answer: Answer: 3’UTR sequences for Saccharomyces Cerevisiae (yeast)
updated 2.8 years ago by 45k • written 5.9 years ago by ▴ 70
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1.6k
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Answer: A: The same location shares different GeneBank Accession in IGV and UCSC?
5.9 years ago by MohammadAlkadi ▴ 70
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5.0k
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Answer: A: Seurat sctransform return.only.var.genes = FALSE
5.9 years ago by MohammadAlkadi ▴ 70
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7.2k
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Comment: C: Nanopore SNP and indels calling tool
7.0 years ago by MohammadAlkadi ▴ 70
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4.4k
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Comment: C: tophat aligns to wrong strand
7.1 years ago by MohammadAlkadi ▴ 70
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1
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4.4k
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Comment: C: tophat aligns to wrong strand
7.1 years ago by MohammadAlkadi ▴ 70
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