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Comment: Comment: Linear Mixed-Effects Model Coefficient Interpretation
9 weeks ago by BioNovice247 ▴ 20
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Linear Mixed-Effects Model Coefficient Interpretation
LMER mixed-effects R modeling
9 weeks ago by BioNovice247 ▴ 20
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How should the the correlation of module eigengenes with categorical external traits be assessed in WGCNA?
RNA-seq Correlation WGCNA
updated 22 months ago by ▴ 80 • written 22 months ago by ▴ 20
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626
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When do we consider TCGA mRNA and miRNA data as matched samples?
TCGA GDC RNA-seq mRNA miRNA
updated 2.2 years ago by ★ 1.2k • written 2.4 years ago by ▴ 20
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How to prepare the data prior to Quantile Normalization for comparisons across studies/platforms ?
microarray normalization RNA-seq Quantile-normalization quantile
2.4 years ago by BioNovice247 ▴ 20
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Comment: Comment: Normalization of RNA-seq data across tumors. Should I pool the samples?
2.4 years ago by BioNovice247 ▴ 20
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Normalization of RNA-seq data across tumors. Should I pool the samples?
DESeq2 TCGA RNA-seq VST Normalization
2.4 years ago by BioNovice247 ▴ 20
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Comment: Comment: PCA plot from read count matrix from RNA-Seq
2.4 years ago by BioNovice247 ▴ 20
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1.7k
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Comment: Comment: What is the most appropriate method for correlation analysis of mRNA-target corr
2.5 years ago by BioNovice247 ▴ 20
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1.7k
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Comment: Comment: What is the most appropriate method for correlation analysis of mRNA-target corr
2.5 years ago by BioNovice247 ▴ 20
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What is the most appropriate method for correlation analysis of mRNA-target correlations? And why?
data pearson spearman expression correlation kendall
2.5 years ago by BioNovice247 ▴ 20
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Comment: Comment: How to normalize Kallisto count matrix collapsed at gene-level with TMM/DESeq2?
2.5 years ago by BioNovice247 ▴ 20
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1.6k
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Comment: Comment: How to normalize Kallisto count matrix collapsed at gene-level with TMM/DESeq2?
2.5 years ago by BioNovice247 ▴ 20
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4
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How to normalize Kallisto count matrix collapsed at gene-level with TMM/DESeq2?
DESeq2 TMM Kallisto edgeR
2.5 years ago by BioNovice247 ▴ 20
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