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Comment: Comment: SRA complete metadata
2.4 years ago by bioguy ▴ 50
2
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2
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685
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SRA complete metadata
SRA NCBI metagenome metadata
2.4 years ago by bioguy ▴ 50
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0
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587
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linking BRENDA ligands to InChlKey
InChlKey CHEBI enzyme BRENDA
3.5 years ago by bioguy ▴ 50
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0
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3.1k
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Comment: C: MESH terms for list of pubmed IDs
4.6 years ago by bioguy ▴ 50
3
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3
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3.1k
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MESH terms for list of pubmed IDs
MESH terms text mining pubmed esearch entrez
updated 4.7 years ago by ▴ 10 • written 4.7 years ago by ▴ 50
2
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0
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3.1k
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Comment: A: MESH terms for list of pubmed IDs
4.7 years ago by bioguy ▴ 50
3
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6
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4.1k
views
Converting assembled genomes (.fna) and predicted genes (.faa) to genbank or gff file?
genome annotation genbank gff microbiology
updated 5.2 years ago by 20 • written 5.4 years ago by ▴ 50
0
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1
reply
2.1k
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compute distance to root of phylogenetic tree
phylogenetics microbiology
updated 5.3 years ago by 88k • written 5.3 years ago by ▴ 50
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0
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4.1k
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Comment: C: Converting assembled genomes (.fna) and predicted genes (.faa) to genbank or gff
5.4 years ago by bioguy ▴ 50
0
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1
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4.1k
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Comment: C: Converting assembled genomes (.fna) and predicted genes (.faa) to genbank or gff
5.4 years ago by bioguy ▴ 50
1
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0
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3.2k
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Answer: A: Comparing the WG sequenced isolate against the other same genus isolates on the
5.4 years ago by bioguy ▴ 50
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0
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4.0k
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Comment: C: percent identities for all by all protein alignment
5.7 years ago by bioguy ▴ 50
1
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2
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4.0k
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Comment: C: percent identities for all by all protein alignment
5.7 years ago by bioguy ▴ 50
4
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10
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4.0k
views
percent identities for all by all protein alignment
blast diamond sequence alignment
updated 5.7 years ago by ▴ 520 • written 5.7 years ago by ▴ 50
2
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2
replies
6.7k
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Only one hit per query on blastn?
blast genomics
5.9 years ago by bioguy ▴ 50
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0
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1.9k
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Comment: C: all by all phylogenetic distances for massive set of ncbi taxon ID's
6.1 years ago by bioguy ▴ 50
3
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2
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1.9k
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all by all phylogenetic distances for massive set of ncbi taxon ID's
phylogeny microbiology taxonomy ncbi taxon id
updated 6.1 years ago by 21k • written 6.1 years ago by ▴ 50
2
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0
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1.5k
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Answer: A: extract EC number from entrez esearch query
6.1 years ago by bioguy ▴ 50
4
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2
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1.5k
views
extract EC number from entrez esearch query
entrez ncbi protein genomics ECID
6.1 years ago by bioguy ▴ 50
1
vote
1
reply
964
views
a mapping between ncbi taxonomy ID and habitat?
microbiology genome
6.2 years ago by bioguy ▴ 50
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