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Comment:  C: Reproducible Science Short Example
updated 20 months ago by 34k • written 6.9 years ago by ★ 1.1k
3
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Answer:  A: how to get actual gene sequence after cufflinks
6.4 years ago by David Fredman ★ 1.1k
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4.1k
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Comment:  C: Counting sense reads in bacterial paired-end RNA-seq data
6.4 years ago by David Fredman ★ 1.1k
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2.6k
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Job:  (Closed) Researcher in informatics - Genomics and Computational Biology, Bergen, Norway
job next-gen sequencing RNA-Seq Job
6.5 years ago by David Fredman ★ 1.1k
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2.5k
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Answer:  A: rnahybrid "Error in nextSQ. Aborting"
6.5 years ago by David Fredman ★ 1.1k
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1.2k
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Answer:  A: R Equivalent of Cross-Gene Error Model (CGEM) (Rocke and Durbin 2001).
6.5 years ago by David Fredman ★ 1.1k
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2.7k
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Comment:  C: Rank Genes By FPKM for only One Sample
6.5 years ago by David Fredman ★ 1.1k
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18k
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Comment:  C: gft to fasta conversion
6.5 years ago by David Fredman ★ 1.1k
2
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1
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18k
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Comment:  C: gft to fasta conversion
6.5 years ago by David Fredman ★ 1.1k
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1
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18k
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Answer:  A: gft to fasta conversion
6.5 years ago by David Fredman ★ 1.1k
3
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1
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7.9k
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Answer:  A: Looking for a tool to do GO enrichment analysis with BLAST2GO output(s)
6.5 years ago by David Fredman ★ 1.1k
1
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0
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7.9k
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Comment:  C: Looking for a tool to do GO enrichment analysis with BLAST2GO output(s)
6.6 years ago by David Fredman ★ 1.1k
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1
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4.8k
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Comment:  C: edgeR / deSeq parallel usage
6.8 years ago by David Fredman ★ 1.1k
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1.5k
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Answer:  A: Grouping columns in a BED like file
6.9 years ago by David Fredman ★ 1.1k
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1
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1.5k
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Comment:  C: Grouping columns in a BED like file
6.9 years ago by David Fredman ★ 1.1k
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1.9k
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Comment:  C: GTF files for cufflinks
6.9 years ago by David Fredman ★ 1.1k
2
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2
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1.9k
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Answer:  A: GTF files for cufflinks
6.9 years ago by David Fredman ★ 1.1k
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1
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4.1k
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Comment:  C: How to get the expression level of specific gene without annotation in RNA-Seq?
6.9 years ago by David Fredman ★ 1.1k
2
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2
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4.1k
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Answer:  A: How to get the expression level of specific gene without annotation in RNA-Seq?
6.9 years ago by David Fredman ★ 1.1k
1
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1
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3.1k
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Comment:  C: How Can Cufflinks Assemble De Novo Transcripts With Many Exons When They Have 0
6.9 years ago by David Fredman ★ 1.1k
12
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1
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15k
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Answer:  A: Annotating sequences after de-novo Trinity assembly and RSEM analysis...there mu
6.9 years ago by David Fredman ★ 1.1k
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0
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15k
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Comment:  C: Annotating sequences after de-novo Trinity assembly and RSEM analysis...there mu
6.9 years ago by David Fredman ★ 1.1k
1
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0
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1.9k
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Answer:  A: How to prepare histogram for uniq reads count
6.9 years ago by David Fredman ★ 1.1k
2
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0
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2.8k
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Answer:  A: Is correct finding unique reads with the flag -F 0x104?
6.9 years ago by David Fredman ★ 1.1k
4
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0
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5.2k
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Answer:  A: How to download reference transcriptome file of species ?
6.9 years ago by David Fredman ★ 1.1k
0
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0
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5.5k
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Comment:  C: Gene_short_name missing in CuffDiff output (or how to retrieve it?)
6.9 years ago by David Fredman ★ 1.1k
3
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1
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2.0k
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Answer:  A: Reproducible Science Short Example
6.9 years ago by David Fredman ★ 1.1k
1
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1
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6.1k
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Comment:  C: Extract common differentially expressed genes (DEGs) of different data sets. (Mi
6.9 years ago by David Fredman ★ 1.1k
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0
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2.0k
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Comment:  C: How can I find the keys from a dictionary in a DNA sequence?
6.9 years ago by David Fredman ★ 1.1k
4
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1
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6.1k
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Answer:  A: Extract common differentially expressed genes (DEGs) of different data sets. (Mi
6.9 years ago by David Fredman ★ 1.1k
1
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0
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4.4k
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Answer:  A: RNA-seq GC content Bimodal distribution
6.9 years ago by David Fredman ★ 1.1k
0
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1
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1.9k
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Answer:  A: miRNA -identification animal
6.9 years ago by David Fredman ★ 1.1k
1
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1
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5.5k
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Comment:  C: Gene_short_name missing in CuffDiff output (or how to retrieve it?)
6.9 years ago by David Fredman ★ 1.1k
10
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0
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10k
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Answer:  A: Best tools for circular genome visualization?
6.9 years ago by David Fredman ★ 1.1k
0
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0
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6.0k
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Comment:  C: how to calculate p-value when the a sample has one value and the other sample h
6.9 years ago by David Fredman ★ 1.1k
0
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0
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4.9k
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Comment:  C: Database for finding SNPs (Mutation-deletion/SNPs) In the promotor region of any
6.9 years ago by David Fredman ★ 1.1k
1
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1
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5.5k
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Comment:  C: Gene_short_name missing in CuffDiff output (or how to retrieve it?)
6.9 years ago by David Fredman ★ 1.1k
1
vote
0
replies
6.0k
views
Answer:  A: how to calculate p-value when the a sample has one value and the other sample h
6.9 years ago by David Fredman ★ 1.1k
1
vote
1
reply
5.5k
views
Comment:  C: Gene_short_name missing in CuffDiff output (or how to retrieve it?)
6.9 years ago by David Fredman ★ 1.1k
3
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1
reply
1.7k
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Answer:  A: R graphs without bar!
6.9 years ago by David Fredman ★ 1.1k
2
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1
reply
4.1k
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Answer:  A: Counting sense reads in bacterial paired-end RNA-seq data
6.9 years ago by David Fredman ★ 1.1k
2
votes
1
reply
4.9k
views
Answer:  A: Database for finding SNPs (Mutation-deletion/SNPs) In the promotor region of any
6.9 years ago by David Fredman ★ 1.1k
0
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0
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3.5k
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Comment:  C: Biomart R package - help writing biomart results into existing file.
6.9 years ago by David Fredman ★ 1.1k
5
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1
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3.5k
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Answer:  A: Biomart R package - help writing biomart results into existing file.
6.9 years ago by David Fredman ★ 1.1k
3
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1
reply
1.4k
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Answer:  A: How to sort PDB name
6.9 years ago by David Fredman ★ 1.1k
1
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0
replies
5.5k
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Answer:  A: Gene_short_name missing in CuffDiff output (or how to retrieve it?)
6.9 years ago by David Fredman ★ 1.1k
0
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0
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2.3k
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Answer:  A: Identifying closest homologue of a protein sequence
6.9 years ago by David Fredman ★ 1.1k
2
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1
reply
4.0k
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Answer:  A: ncRNA Vs miRNA
6.9 years ago by David Fredman ★ 1.1k
21
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3
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43k
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Answer:  Answer: TCGA: What are mRNA expression z-scores? Does TCGA have mRNA expression from con
updated 9 weeks ago by 34k • written 6.9 years ago by ★ 1.1k
49 results • Page 1 of 1
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