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Answer: Answer: Download whole 1000 genome phase 3 for LD clumping
2.4 years ago by Vivek ★ 2.7k
2
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0
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853
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Answer: A: concordance metrics for exome trio analysis
3.6 years ago by Vivek ★ 2.7k
4
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0
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2.5k
views
Answer: A: Identify overlapping coordinates
updated 3.7 years ago by 40k • written 9.4 years ago by ★ 2.7k
5
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2
replies
14k
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Answer: A: How to efficiently remove a list of reads from BAM file?
updated 3.8 years ago by 40k • written 7.7 years ago by ★ 2.7k
0
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1
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2.0k
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Answer: A: Multiple Exon Start and End sites in UCSC Exons table
updated 3.9 years ago by 40k • written 7.9 years ago by ★ 2.7k
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1
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4.2k
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Answer: A: comparing vcf files of disease and normal samples
updated 3.9 years ago by 40k • written 9.3 years ago by ★ 2.7k
0
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0
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3.7k
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Answer: A: Annovar and CADD Annotation
updated 3.9 years ago by 40k • written 8.2 years ago by ★ 2.7k
2
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1
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3.5k
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Answer: A: How to find de novo mutation in trio sequencing data in perl or python script?
updated 4.0 years ago by 40k • written 9.0 years ago by ★ 2.7k
2
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0
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12k
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Answer: A: Perl script running slow with big files
updated 4.0 years ago by 40k • written 9.2 years ago by ★ 2.7k
58
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3
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59k
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Answer: A: VCF files: Change Chromosome Notation
updated 4.3 years ago by 40k • written 9.4 years ago by ★ 2.7k
3
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0
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20k
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Answer: A: Remove Vcf Header Lines
updated 4.6 years ago by 11k • written 11.2 years ago by ★ 2.7k
3
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1
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2.1k
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Answer: A: GWAS data analysis strategy or pipeline
4.9 years ago by Vivek ★ 2.7k
1
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1
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2.8k
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Answer: A: How to generate text file having SNP list from bim file in plink?
5.6 years ago by Vivek ★ 2.7k
0
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0
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1.3k
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Answer: A: Individual chromosome SNP VCF
5.7 years ago by Vivek ★ 2.7k
0
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0
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4.3k
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Answer: A: Calculating ethnicity of a sample VCF
6.1 years ago by Vivek ★ 2.7k
2
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1
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1.7k
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Answer: A: Hardy Weinberg data from 1000 genomes project
6.2 years ago by Vivek ★ 2.7k
6
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2
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3.6k
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Answer: A: retrieving from ExAC in VCF format
6.2 years ago by Vivek ★ 2.7k
0
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1
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1.5k
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Answer: A: Mapping ORFs to Chromosome locations
6.2 years ago by Vivek ★ 2.7k
2
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1
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1.9k
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Answer: A: tips for checking variants in IGV
6.3 years ago by Vivek ★ 2.7k
3
votes
0
replies
1.3k
views
Answer: A: question regarding bioinformatics jobs in US
6.3 years ago by Vivek ★ 2.7k
0
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1
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1.2k
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Answer: A: Protein Change Annotation from Oncotator
6.6 years ago by Vivek ★ 2.7k
1
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1
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2.4k
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Answer: A: Question about GATK hardfiltering conditions
6.7 years ago by Vivek ★ 2.7k
2
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1
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2.9k
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Answer: A: Principal Component Analysis
6.7 years ago by Vivek ★ 2.7k
1
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0
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1.9k
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Answer: A: plot coverage for WES data
6.7 years ago by Vivek ★ 2.7k
1
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1
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4.6k
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Answer: A: how to analyse gene expression using RNA-seq data
6.7 years ago by Vivek ★ 2.7k
0
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1
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1.8k
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Answer: A: SVM based Filtering For NGS data
6.7 years ago by Vivek ★ 2.7k
1
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2
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1.5k
views
Answer: A: Mapping two WGS Data
6.7 years ago by Vivek ★ 2.7k
1
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0
replies
2.6k
views
Answer: A: Annovar Output column "AAChange.knowngene" gives different values
6.7 years ago by Vivek ★ 2.7k
0
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1
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1.4k
views
Answer: A: identifying mutation & copy numbers using sequencing data
6.8 years ago by Vivek ★ 2.7k
1
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0
replies
1.6k
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Answer: A: Software to identify and classify disease-relevant variants
6.9 years ago by Vivek ★ 2.7k
7
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1
reply
2.6k
views
Answer: A: Is it better to remove MT reads by removing the MT Chromosome from your fasta or
6.9 years ago by Vivek ★ 2.7k
2
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0
replies
1.4k
views
Answer: A: Some tricks from the experts
6.9 years ago by Vivek ★ 2.7k
0
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0
replies
3.0k
views
Answer: A: Bioinformatics tech vs Bioinformatics scientist
7.1 years ago by Vivek ★ 2.7k
2
votes
1
reply
2.6k
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Answer: A: Method to merge two vcf files that don't have same alt information
7.1 years ago by Vivek ★ 2.7k
5
votes
1
reply
17k
views
Answer: A: extract and generate a VCF file with only "PASS"
7.1 years ago by Vivek ★ 2.7k
3
votes
0
replies
8.5k
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Answer: A: Good Habit for Bioinformatics Analyst or Scientist
7.4 years ago by Vivek ★ 2.7k
0
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1
reply
2.6k
views
Answer: A: How to merge different strain SNP vcf files into one combined vcf file with stra
7.4 years ago by Vivek ★ 2.7k
0
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0
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2.4k
views
Answer: A: getting germline mutations
7.5 years ago by Vivek ★ 2.7k
4
votes
1
reply
4.2k
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Answer: A: Do I need to use hg19 or hg38 reference for performing variant calling analysis
7.5 years ago by Vivek ★ 2.7k
0
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1
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3.7k
views
Answer: A: VCF to genotype file of specific format
7.6 years ago by Vivek ★ 2.7k
3
votes
0
replies
3.4k
views
Answer: A: How can I compare two columns of a two VCF files
7.7 years ago by Vivek ★ 2.7k
1
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0
replies
2.0k
views
Answer: A: Discrepancy between Whole Exome Sequence result and Sanger Sequence result
7.7 years ago by Vivek ★ 2.7k
0
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1
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2.4k
views
Answer: A: two questions in loading data
7.9 years ago by Vivek ★ 2.7k
0
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0
replies
4.3k
views
Answer: A: Hot research areas in Bioinformatics for career development
7.9 years ago by Vivek ★ 2.7k
1
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0
replies
2.9k
views
Answer: Answer: How to check the reads coverage of an area in ExAC, ESP6500, and 1000Genomes
updated 12 months ago by 40k • written 8.1 years ago by ★ 2.7k
0
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0
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2.0k
views
Answer: Answer: What are the different ways of referring to a genetic variant/ mutation?
updated 12 months ago by 40k • written 8.1 years ago by ★ 2.7k
3
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1
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3.0k
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Answer: A: How to bulk convert coding position of transkript to genomic positions?
8.3 years ago by Vivek ★ 2.7k
1
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0
replies
4.4k
views
Answer: Answer: Authorship issues- how to resolve?
updated 8 months ago by 40k • written 8.3 years ago by ★ 2.7k
0
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0
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3.7k
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Answer: Answer: Making fasta file for clustal
updated 8 months ago by 40k • written 8.3 years ago by ★ 2.7k
7
votes
0
replies
3.9k
views
Answer: Answer: Phasing trios for identification of denovo variants
updated 8 months ago by 40k • written 8.4 years ago by ★ 2.7k
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