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Checking a SNP as common SNP or not using UCSC genome browser
SNP
UCSC-genome-browser
updated 13 months ago by
Ram
44k • written 13 months ago by
maricom
• 0
0
votes
3
replies
1.1k
views
How to tell which exon does a variant located?
HGVSc
HGVSp
variant
exon
updated 18 months ago by
Ram
44k • written 18 months ago by
maricom
• 0
0
votes
0
replies
838
views
Comment:
Comment: sequence error
2.2 years ago by
maricom
• 0
0
votes
0
replies
862
views
Comment:
Comment: homopolymer error
2.2 years ago by
maricom
• 0
0
votes
2
replies
833
views
How to read gene variants
NGS
variant
variantcall
MiSeq
2.2 years ago by
maricom
• 0
0
votes
0
replies
833
views
Comment:
Comment: How to read gene variants
2.2 years ago by
maricom
• 0
0
votes
0
replies
1.2k
views
Comment:
Comment: allele frequency vs allele fraction
2.2 years ago by
maricom
• 0
0
votes
0
replies
927
views
Comment:
Comment: Criteria for variant call
2.2 years ago by
maricom
• 0
1
vote
2
replies
838
views
sequence error
NGS
MiSeq
2.2 years ago by
maricom
• 0
0
votes
2
replies
862
views
homopolymer error
NGS
MiSeq
2.2 years ago by
maricom
• 0
0
votes
2
replies
1.2k
views
allele frequency vs allele fraction
NGS
MiSeq
2.2 years ago by
maricom
• 0
0
votes
2
replies
927
views
Criteria for variant call
NGS
variant
variantcall
clinicalresearch
MiSeq
2.2 years ago by
maricom
• 0
0
votes
0
replies
922
views
Comment:
C: operon for rRNA genes
5.2 years ago by
maricom
• 0
0
votes
2
replies
922
views
operon for rRNA genes
rRNA
operon
5.2 years ago by
maricom
• 0
0
votes
0
replies
1.7k
views
Comment:
C: snpEff for bacteria genome
5.3 years ago by
maricom
• 0
0
votes
2
replies
1.7k
views
snpEff for bacteria genome
SnpEff
5.3 years ago by
maricom
• 0
0
votes
0
replies
1.5k
views
Answer:
A: gatk HaplotypeCaller options
5.3 years ago by
maricom
• 0
0
votes
2
replies
1.5k
views
gatk HaplotypeCaller options
gatk
5.3 years ago by
maricom
• 0
0
votes
1
reply
2.5k
views
Comment:
C: Warning errors in snpEff annotation results
5.3 years ago by
maricom
• 0
0
votes
3
replies
2.5k
views
Warning errors in snpEff annotation results
SNP
5.3 years ago by
maricom
• 0
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