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Comment: Comment: the fixed-effects model matrix is column rank deficient when adding a variable
2.9 years ago by Will ▴ 10
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Comment: Comment: fixed effect vs random effects RNA analysis
2.9 years ago by Will ▴ 10
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4.2k
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Comment: Comment: fixed effect vs random effects RNA analysis
2.9 years ago by Will ▴ 10
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4.2k
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Comment: Comment: fixed effect vs random effects RNA analysis
2.9 years ago by Will ▴ 10
15
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8
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4.2k
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fixed effect vs random effects RNA analysis
variancePartition voom LIMMA DE RNA
updated 2.9 years ago by ★ 1.8k • written 2.9 years ago by ▴ 10
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1.7k
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Comment: Comment: the fixed-effects model matrix is column rank deficient when adding a variable
2.9 years ago by Will ▴ 10
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5
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1.7k
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the fixed-effects model matrix is column rank deficient when adding a variable
voom LIMMA dream RNA rescale
updated 2.9 years ago by ▴ 310 • written 2.9 years ago by ▴ 10
3
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1
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4.8k
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When use enricher function or GSEA of clusterProfiler R
GSEA enricher genes enrichment clusterProfiler
updated 3.0 years ago by 35k • written 3.0 years ago by ▴ 10
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2.1k
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Comment: Comment: CPM threshold for RNASeq count data
3.0 years ago by Will ▴ 10
2
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4
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2.1k
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CPM threshold for RNASeq count data
Count RNASeq cpm filtering edgeR
3.0 years ago by Will ▴ 10
2
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2
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13k
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Enrichment Score Interpretation
RNA-Seq R pathways gsea Enrichment
updated 3.2 years ago by ▴ 270 • written 3.2 years ago by ▴ 10
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0
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1.1k
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Comment: C: Math behind association with PLINK
3.3 years ago by Will ▴ 10
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4
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1.1k
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Math behind association with PLINK
plink association gwas
updated 2.5 years ago by ▴ 10 • written 3.3 years ago by ▴ 10
0
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2
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12k
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Comment: C: How I do lift over a Plink bim file from Hg18 to Hg19.
4.2 years ago by Will ▴ 10
0
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1
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774
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Problem on mapping SNP ID
SNP Illumina
4.2 years ago by Will ▴ 10
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2.7k
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Comment: C: Filtered a .vcf file based on id of a second file
4.8 years ago by Will ▴ 10
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Comment: A: Filtered a .vcf file based on id of a second file
updated 4.8 years ago by 16k • written 4.8 years ago by ▴ 10
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5
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2.7k
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Filtered a .vcf file based on id of a second file
SNP snp bcftools vcf
4.8 years ago by Will ▴ 10
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