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Comment: C: GATK GermlineCNVCaller & PostprocessGermlineCNVCalls
4.6 years ago by Matthieu Miossec ▴ 370
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4.9k
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Comment: C: Recommendations for CNV calling algorithms/programs to benchmark
4.7 years ago by Matthieu Miossec ▴ 370
1
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0
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2.9k
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Answer: A: GATK GermlineCNVCaller & PostprocessGermlineCNVCalls
5.1 years ago by Matthieu Miossec ▴ 370
0
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0
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2.3k
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Comment: C: Locus in my snps.vcf file
8.3 years ago by Matthieu Miossec ▴ 370
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2
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2.3k
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Answer: A: Locus in my snps.vcf file
8.3 years ago by Matthieu Miossec ▴ 370
0
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1
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4.0k
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Comment: C: Large VCF QUAL Values
8.3 years ago by Matthieu Miossec ▴ 370
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1
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5.3k
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Comment: C: VCF file without SNPs
8.4 years ago by Matthieu Miossec ▴ 370
2
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0
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2.1k
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Answer: A: How to make a SRR download list
8.4 years ago by Matthieu Miossec ▴ 370
1
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1
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2.7k
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Comment: C: Remove variants from VCF by INFO tag
8.4 years ago by Matthieu Miossec ▴ 370
3
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2
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2.7k
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Answer: A: Remove variants from VCF by INFO tag
8.4 years ago by Matthieu Miossec ▴ 370
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0
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3.0k
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Comment: C: SNP annotation of A VCF file
8.4 years ago by Matthieu Miossec ▴ 370
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0
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1.5k
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Comment: C: not getting values for Filter columns with vcf files generated using SAMTOOLS Mp
8.4 years ago by Matthieu Miossec ▴ 370
1
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0
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2.3k
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Answer: A: Merge BAM files without retaining sample information
8.4 years ago by Matthieu Miossec ▴ 370
3
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2
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1.6k
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Answer: A: Genes by Protein Domain
8.4 years ago by Matthieu Miossec ▴ 370
0
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0
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35k
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Comment: C: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
8.4 years ago by Matthieu Miossec ▴ 370
2
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0
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2.2k
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Answer: A: retrieval of population specific SNPs
8.4 years ago by Matthieu Miossec ▴ 370
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0
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3.1k
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Comment: Comment: Question about ExomeDepth's output
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 370
0
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1
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2.2k
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Comment: C: how to select candidate genes after resequencing
10.3 years ago by Matthieu Miossec ▴ 370
1
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0
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2.3k
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Answer: Answer: Looking for individual genome browsers
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 370
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0
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2.4k
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Comment: C: How Large Can A Coverage Discrepancy Be Between Two Aligners, Specifically Bwa A
11.2 years ago by Matthieu Miossec ▴ 370
7
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3
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2.4k
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How Large Can A Coverage Discrepancy Be Between Two Aligners, Specifically Bwa And Novoalign
bwa alignment
updated 11.2 years ago by 22k • written 11.4 years ago by ▴ 370
2
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0
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3.3k
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Answer: A: Snp Calling + Somatic Mutation On X & Y Chromosomes
11.3 years ago by Matthieu Miossec ▴ 370
1
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0
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18k
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Comment: C: Advice For Newcomers To The Bioinformatics Field
11.3 years ago by Matthieu Miossec ▴ 370
2
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1
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17k
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Comment: C: What Do You Waste Your Time On
11.4 years ago by Matthieu Miossec ▴ 370
0
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1
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5.5k
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Comment: C: Problems While Filtering Rare Variants With Annovar
11.4 years ago by Matthieu Miossec ▴ 370
1
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0
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3.9k
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Answer: A: How To Interpret Dp Fields For Samples In Vcf Files?
11.4 years ago by Matthieu Miossec ▴ 370
0
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0
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17k
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Comment: C: List Of Bioinformatics Books
11.4 years ago by Matthieu Miossec ▴ 370
1
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0
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3.4k
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Comment: C: Does Samtools Tview Hide Pcr And Optical Duplicates?
11.4 years ago by Matthieu Miossec ▴ 370
8
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3
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3.4k
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Does Samtools Tview Hide Pcr And Optical Duplicates?
samtools bam duplicates
updated 11.4 years ago by 12k • written 11.4 years ago by ▴ 370
0
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0
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4.7k
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Comment: C: Freebayes And Mpileup Filtering Query
11.4 years ago by Matthieu Miossec ▴ 370
0
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0
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44k
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Comment: C: Any Good Bam And Sam Viewer?
11.4 years ago by Matthieu Miossec ▴ 370
0
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1
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2.7k
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Comment: C: Tool To Reduce The Intersection Of Two Bam Files
11.4 years ago by Matthieu Miossec ▴ 370
1
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1
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2.9k
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Does Anybody Know Which Gatk Walkers Are Positively Affected By Pedigree Information?
gatk calling
updated 11.4 years ago by ★ 1.2k • written 11.4 years ago by ▴ 370
0
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0
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7.1k
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Answer: A: Extract Fasta Sequences From File Which Are Not Present In Other Fasta File
11.4 years ago by Matthieu Miossec ▴ 370
2
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1
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3.6k
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Answer: A: What Are The Next Steps For Processing Indels From Gatk
11.4 years ago by Matthieu Miossec ▴ 370
0
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0
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2.9k
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Comment: C: State Of The Art In Base-Calling?
11.6 years ago by Matthieu Miossec ▴ 370
4
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0
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4.1k
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Answer: A: Rare Variant Snps With No Allele Frequency
11.6 years ago by Matthieu Miossec ▴ 370
0
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1
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9.3k
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Comment: C: Lofreq: A Fast And Sensitive Variant-Caller For Inferring Single-Nucleotide Vari
11.6 years ago by Matthieu Miossec ▴ 370
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