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0
votes
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replies
1.9k
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How to run BOLT-LMM against a Plink simulated dataset?
BOLT-LMM
PLINK
4.5 years ago by
b.ambrozio
▴ 30
0
votes
0
replies
758
views
How to extract the classification/regression metrics from a GWAS so that I can compare different tools?
plink
SAIGE
GCTA
BOLT-LMM
metrics
4.5 years ago by
b.ambrozio
▴ 30
3
votes
1
reply
1.7k
views
How to simulate phenotype from real genetic data for GWAS purpose?
gcta
plink
updated 4.6 years ago by
jian.yang.qt
▴ 30 • written 4.6 years ago by
b.ambrozio
▴ 30
1
vote
0
replies
39k
views
Answer:
A: how to remove multiallelic from VCF
4.6 years ago by
b.ambrozio
▴ 30
0
votes
0
replies
849
views
Comment:
C: How to simulate 100k samples having 40 million SNPs in a proportion of case:cont
4.6 years ago by
b.ambrozio
▴ 30
0
votes
3
replies
849
views
How to simulate 100k samples having 40 million SNPs in a proportion of case:control=30:70?
plink
gwas
updated 4.7 years ago by
zx8754
12k • written 4.7 years ago by
b.ambrozio
▴ 30
8
votes
2
replies
2.4k
views
What is the state of the art for GWAS in terms of statistical algorithm for either Case/control and Quantitative traits?
GWAS
LMM
updated 4.9 years ago by
chrchang523
11k • written 4.9 years ago by
b.ambrozio
▴ 30
1
vote
1
reply
2.0k
views
Answer:
A: Any fast way to download 1000 Genome Phase 3?
4.9 years ago by
b.ambrozio
▴ 30
3
votes
4
replies
2.0k
views
Any fast way to download 1000 Genome Phase 3?
aspera
fasp
1000genomes
4.9 years ago by
b.ambrozio
▴ 30
0
votes
1
reply
1.5k
views
Any practical example/tutorial on how to simulate phenotypes from 1000 Genomes?
GCTA
1000Genomes
4.9 years ago by
b.ambrozio
▴ 30
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