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How to Analyze 10x Genomics Data with Full-Length R1 and R2 (100bp Each)?
10x-Genomics UMI single-cell RNA-Seq CellRanger
updated 8 months ago by 154k • written 8 months ago by ▴ 30
0
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1.4k
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Comment: Comment: UMI collapsing in single cell
10 months ago by zbidav ▴ 30
2
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3
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1.4k
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UMI collapsing in single cell
10x UMI single-cell collapse
updated 10 months ago by 22k • written 10 months ago by ▴ 30
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0
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5.4k
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Comment: Comment: Separate single cell BAM file by the cell barcode
13 months ago by zbidav ▴ 30
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0
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1.9k
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Comment: Comment: Multiple same UMI's mapped to the same cell with different sequence
16 months ago by zbidav ▴ 30
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1
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1.9k
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Comment: Comment: Multiple same UMI's mapped to the same cell with different sequence
16 months ago by zbidav ▴ 30
5
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4
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1.9k
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Multiple same UMI's mapped to the same cell with different sequence
10x UMI BAM scRNAseq Barcode
16 months ago by zbidav ▴ 30
0
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1
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5.4k
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Comment: Comment: Separate single cell BAM file by the cell barcode
16 months ago by zbidav ▴ 30
0
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1
reply
5.4k
views
Comment: Comment: Separate single cell BAM file by the cell barcode
2.3 years ago by zbidav ▴ 30
0
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1
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5.4k
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Comment: Comment: Separate single cell BAM file by the cell barcode
2.3 years ago by zbidav ▴ 30
2
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8
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5.4k
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Separate single cell BAM file by the cell barcode
BAM scRNAseq single-cell
updated 11 months ago by 154k • written 2.3 years ago by ▴ 30
7
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3
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1.3k
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Statistical test in the case of low replicate number in RNAseq analysis
replicate Statistics RNAseq low
updated 3.2 years ago by 2.9k • written 3.2 years ago by ▴ 30
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2
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3.7k
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Comment: Comment: How to interpret a tSNE or UMAP plot to get biological conclusions ?
3.2 years ago by zbidav ▴ 30
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0
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2.9k
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Comment: Comment: Error: All columns in a tibble must be 1d or 2d objects:
3.4 years ago by zbidav ▴ 30
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0
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2.2k
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Comment: Comment: Demultiplexing RNAseq data with tag file and barcodes (single end)
3.4 years ago by zbidav ▴ 30
0
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6
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2.2k
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Demultiplexing RNAseq data with tag file and barcodes (single end)
RNAseq bash Demultiplexing zUMI
3.4 years ago by zbidav ▴ 30
0
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0
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2.2k
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Comment: Comment: Demultiplexing RNAseq data with tag file and barcodes (single end)
3.4 years ago by zbidav ▴ 30
0
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1
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2.2k
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Comment: Comment: Demultiplexing RNAseq data with tag file and barcodes (single end)
3.4 years ago by zbidav ▴ 30
2
votes
1
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846
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Extracting specific regions from bam file as FASTA format
samtools fasta
updated 4.0 years ago by 154k • written 4.0 years ago by ▴ 30
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