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Comment: Comment: How to perform synteny alignments and plots only with a gene?
2.6 years ago by cmdcolin ★ 4.4k
4
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1
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6.0k
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Answer: Answer: How to perform synteny alignments and plots only with a gene?
2.6 years ago by cmdcolin ★ 4.4k
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0
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2.3k
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Comment: Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
2.6 years ago by cmdcolin ★ 4.4k
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1
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2.3k
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Comment: Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
2.6 years ago by cmdcolin ★ 4.4k
0
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1
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2.3k
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Answer: Answer: How to remove homozygous reference genotypes from multi-sample vcf file based on
2.6 years ago by cmdcolin ★ 4.4k
2
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0
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1.9k
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Answer: Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
2.6 years ago by cmdcolin ★ 4.4k
4
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2
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3.8k
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Answer: Answer: Realigning BAM files to new reference
16 months ago by cmdcolin ★ 4.4k
0
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1
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1.7k
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Comment: Comment: what does total count mean at a location in IGV
2.6 years ago by cmdcolin ★ 4.4k
2
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1
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5.3k
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Answer: Answer: Rust bioinformatics projects ideas
2.7 years ago by cmdcolin ★ 4.4k
0
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1
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1.5k
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Answer: Answer: Alternatives to Lollipop for virus variant data
2.7 years ago by cmdcolin ★ 4.4k
1
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0
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123k
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Comment: Comment: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
2.7 years ago by cmdcolin ★ 4.4k
0
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0
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924
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Comment: Comment: Visualize variants and percentage of variants from one sample of Amplicon Seq da
2.7 years ago by cmdcolin ★ 4.4k
5
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0
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1.8k
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Tool: BAM index visualizer - a tool for helping to understand the BAI file format
bam
2.8 years ago by cmdcolin ★ 4.4k
4
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1
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2.1k
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Answer: Answer: Gviz python alternative
2.8 years ago by cmdcolin ★ 4.4k
1
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0
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3.9k
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Comment: Comment: Mapping a small number of contigs to a reference subsequence
2.8 years ago by cmdcolin ★ 4.4k
0
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2
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7.6k
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Comment: Comment: bedGraph to bigwig
2.8 years ago by cmdcolin ★ 4.4k
4
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1
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3.9k
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Answer: Answer: Mapping a small number of contigs to a reference subsequence
2.8 years ago by cmdcolin ★ 4.4k
0
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1
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1.3k
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Answer: Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
2.8 years ago by cmdcolin ★ 4.4k
0
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0
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1.7k
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Comment: Comment: JBrowse on GitHub (A question about file size)
2.8 years ago by cmdcolin ★ 4.4k
2
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1
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1.7k
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Answer: Answer: JBrowse on GitHub (A question about file size)
2.8 years ago by cmdcolin ★ 4.4k
0
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0
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10k
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Answer: Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
2.8 years ago by cmdcolin ★ 4.4k
0
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0
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1.6k
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Comment: Comment: Extract alignment in fasta format from BAM/SAM file
2.8 years ago by cmdcolin ★ 4.4k
0
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0
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2.1k
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Comment: Comment: Get length of the alignment from bam file with shell
2.8 years ago by cmdcolin ★ 4.4k
4
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2
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3.7k
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Answer: Answer: How to calculate coverage of Nanopore long read data?
14 months ago by cmdcolin ★ 4.4k
0
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0
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2.2k
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Comment: Comment: batch sequence retrieval using exon coordinates
2.8 years ago by cmdcolin ★ 4.4k
0
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0
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1.6k
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Comment: Comment: remove CIGAR strings starting with insertion
updated 2.8 years ago by 45k • written 2.8 years ago by ★ 4.4k
3
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1
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1.6k
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Answer: Answer: remove CIGAR strings starting with insertion
2.8 years ago by cmdcolin ★ 4.4k
0
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1
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1.3k
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Comment: Comment: Gene location of both inherited gene
2.8 years ago by cmdcolin ★ 4.4k
3
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1
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1.3k
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Answer: Answer: Gene location of both inherited gene
2.8 years ago by cmdcolin ★ 4.4k
0
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0
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3.5k
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Comment: Comment: find the mate of a read using pysam
2.9 years ago by cmdcolin ★ 4.4k
0
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1
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3.5k
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Comment: Comment: find the mate of a read using pysam
2.9 years ago by cmdcolin ★ 4.4k
1
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1
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8.1k
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Comment: Comment: pyCirclize - Circular visualization in Python
2.9 years ago by cmdcolin ★ 4.4k
0
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0
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43k
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Comment: Comment: Difference Between "Mate Pair" And "Pair-End"
2.9 years ago by cmdcolin ★ 4.4k
0
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1
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2.8k
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Comment: Comment: How is p-value calculated in MACS2
2.9 years ago by cmdcolin ★ 4.4k
1
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1
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2.8k
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Answer: Answer: How is p-value calculated in MACS2
2.9 years ago by cmdcolin ★ 4.4k
2
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1
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25k
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Comment: Comment: What are Supplementary Reads?
2.9 years ago by cmdcolin ★ 4.4k
3
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1
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25k
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Answer: Answer: What's Supplementary Reads?
2.9 years ago by cmdcolin ★ 4.4k
4
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1
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123k
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Answer: Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
2.9 years ago by cmdcolin ★ 4.4k
1
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0
replies
2.3k
views
Comment: Comment: Visualization tools for phased haplotypes
2.9 years ago by cmdcolin ★ 4.4k
0
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1
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2.3k
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Comment: Comment: Visualization tools for phased haplotypes
2.9 years ago by cmdcolin ★ 4.4k
0
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0
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825
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Answer: Answer: CNV evaluate confidence
3.0 years ago by cmdcolin ★ 4.4k
3
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0
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1.2k
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Comment: Comment: The Biostar Herald for Monday, November 14, 2022
3.0 years ago by cmdcolin ★ 4.4k
0
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0
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3.2k
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Comment: Comment: How to open/work with wig or tdf files
3.0 years ago by cmdcolin ★ 4.4k
1
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0
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1.5k
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Comment: Comment: Databases with Genes <-> Diseases relations
3.1 years ago by cmdcolin ★ 4.4k
1
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1
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1.5k
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Answer: Answer: Databases with Genes <-> Diseases relations
3.1 years ago by cmdcolin ★ 4.4k
1
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0
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4.7k
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Answer: Answer: Tools to plot gene arrow diagram
3.1 years ago by cmdcolin ★ 4.4k
0
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1
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929
views
Answer: Answer: Tool to detect small inversion in plastome
3.1 years ago by cmdcolin ★ 4.4k
0
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0
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2.8k
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Answer: Answer: Tool for extracting part of aligned sequence by CIGAR string
3.1 years ago by cmdcolin ★ 4.4k
0
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1
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3.2k
views
Comment: Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
3.1 years ago by cmdcolin ★ 4.4k
0
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1
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3.2k
views
Comment: Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
3.1 years ago by cmdcolin ★ 4.4k
605 results • Page 5 of 13
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