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Answer: Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
2.5 years ago by cmdcolin ★ 4.3k
4
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2
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3.6k
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Answer: Answer: Realigning BAM files to new reference
14 months ago by cmdcolin ★ 4.3k
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1
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1.6k
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Comment: Comment: what does total count mean at a location in IGV
2.5 years ago by cmdcolin ★ 4.3k
2
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1
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4.9k
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Answer: Answer: Rust bioinformatics projects ideas
2.5 years ago by cmdcolin ★ 4.3k
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1
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1.4k
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Answer: Answer: Alternatives to Lollipop for virus variant data
2.6 years ago by cmdcolin ★ 4.3k
1
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121k
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Comment: Comment: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
2.6 years ago by cmdcolin ★ 4.3k
0
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864
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Comment: Comment: Visualize variants and percentage of variants from one sample of Amplicon Seq da
2.6 years ago by cmdcolin ★ 4.3k
5
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1.6k
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Tool: BAM index visualizer - a tool for helping to understand the BAI file format
bam
2.6 years ago by cmdcolin ★ 4.3k
4
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1
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1.9k
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Answer: Answer: Gviz python alternative
2.6 years ago by cmdcolin ★ 4.3k
1
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3.6k
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Comment: Comment: Mapping a small number of contigs to a reference subsequence
2.6 years ago by cmdcolin ★ 4.3k
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2
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7.1k
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Comment: Comment: bedGraph to bigwig
2.6 years ago by cmdcolin ★ 4.3k
4
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3.6k
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Answer: Answer: Mapping a small number of contigs to a reference subsequence
2.6 years ago by cmdcolin ★ 4.3k
0
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1
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1.2k
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Answer: Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
2.7 years ago by cmdcolin ★ 4.3k
0
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1.5k
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Comment: Comment: JBrowse on GitHub (A question about file size)
2.7 years ago by cmdcolin ★ 4.3k
2
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1
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1.5k
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Answer: Answer: JBrowse on GitHub (A question about file size)
2.7 years ago by cmdcolin ★ 4.3k
0
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9.9k
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Answer: Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
2.7 years ago by cmdcolin ★ 4.3k
0
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0
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1.5k
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Comment: Comment: Extract alignment in fasta format from BAM/SAM file
2.7 years ago by cmdcolin ★ 4.3k
0
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2.0k
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Comment: Comment: Get length of the alignment from bam file with shell
2.7 years ago by cmdcolin ★ 4.3k
4
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2
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3.4k
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Answer: Answer: How to calculate coverage of Nanopore long read data?
12 months ago by cmdcolin ★ 4.3k
0
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0
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2.0k
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Comment: Comment: batch sequence retrieval using exon coordinates
2.7 years ago by cmdcolin ★ 4.3k
0
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1.5k
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Comment: Comment: remove CIGAR strings starting with insertion
updated 2.7 years ago by 45k • written 2.7 years ago by ★ 4.3k
3
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1
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1.5k
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Answer: Answer: remove CIGAR strings starting with insertion
2.7 years ago by cmdcolin ★ 4.3k
0
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1
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1.1k
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Comment: Comment: Gene location of both inherited gene
2.7 years ago by cmdcolin ★ 4.3k
3
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1
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1.1k
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Answer: Answer: Gene location of both inherited gene
2.7 years ago by cmdcolin ★ 4.3k
0
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3.3k
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Comment: Comment: find the mate of a read using pysam
2.7 years ago by cmdcolin ★ 4.3k
0
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1
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3.3k
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Comment: Comment: find the mate of a read using pysam
2.7 years ago by cmdcolin ★ 4.3k
1
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1
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7.4k
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Comment: Comment: pyCirclize - Circular visualization in Python
2.7 years ago by cmdcolin ★ 4.3k
0
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0
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43k
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Comment: Comment: Difference Between "Mate Pair" And "Pair-End"
2.8 years ago by cmdcolin ★ 4.3k
0
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1
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2.6k
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Comment: Comment: How is p-value calculated in MACS2
2.8 years ago by cmdcolin ★ 4.3k
1
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1
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2.6k
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Answer: Answer: How is p-value calculated in MACS2
2.8 years ago by cmdcolin ★ 4.3k
2
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1
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24k
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Comment: Comment: What are Supplementary Reads?
2.8 years ago by cmdcolin ★ 4.3k
3
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1
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24k
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Answer: Answer: What's Supplementary Reads?
2.8 years ago by cmdcolin ★ 4.3k
4
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1
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121k
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Answer: Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
2.8 years ago by cmdcolin ★ 4.3k
1
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0
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2.1k
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Comment: Comment: Visualization tools for phased haplotypes
2.8 years ago by cmdcolin ★ 4.3k
0
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1
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2.1k
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Comment: Comment: Visualization tools for phased haplotypes
2.8 years ago by cmdcolin ★ 4.3k
0
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0
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758
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Answer: Answer: CNV evaluate confidence
2.8 years ago by cmdcolin ★ 4.3k
3
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0
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1.1k
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Comment: Comment: The Biostar Herald for Monday, November 14, 2022
2.8 years ago by cmdcolin ★ 4.3k
0
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0
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3.0k
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Comment: Comment: How to open/work with wig or tdf files
2.9 years ago by cmdcolin ★ 4.3k
1
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0
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1.3k
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Comment: Comment: Databases with Genes <-> Diseases relations
2.9 years ago by cmdcolin ★ 4.3k
1
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1
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1.3k
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Answer: Answer: Databases with Genes <-> Diseases relations
2.9 years ago by cmdcolin ★ 4.3k
1
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0
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4.5k
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Answer: Answer: Tools to plot gene arrow diagram
3.0 years ago by cmdcolin ★ 4.3k
0
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1
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845
views
Answer: Answer: Tool to detect small inversion in plastome
3.0 years ago by cmdcolin ★ 4.3k
0
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0
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2.6k
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Answer: Answer: Tool for extracting part of aligned sequence by CIGAR string
3.0 years ago by cmdcolin ★ 4.3k
0
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1
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2.8k
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Comment: Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
3.0 years ago by cmdcolin ★ 4.3k
0
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1
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2.8k
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Comment: Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
3.0 years ago by cmdcolin ★ 4.3k
0
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1
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3.2k
views
Comment: Comment: From fastq files to fasta
3.0 years ago by cmdcolin ★ 4.3k
0
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0
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4.5k
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Comment: Comment: Tools to obtain sequence from bam file
3.0 years ago by cmdcolin ★ 4.3k
0
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0
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4.0k
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Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
3.0 years ago by cmdcolin ★ 4.3k
0
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2
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4.0k
views
Comment: Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
3.0 years ago by cmdcolin ★ 4.3k
0
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1
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1.7k
views
Comment: Comment: Which VCF file to select for generating Multiple sequence alignment of a gene?
3.0 years ago by cmdcolin ★ 4.3k
600 results • Page 5 of 12
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