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Comment:
Comment: Is my estimated genome coverage correct?
12 months ago by
cmdcolin
★ 3.8k
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0
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3.8k
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Comment:
Comment: Finding Pdb File For Specific Transcript
13 months ago by
cmdcolin
★ 3.8k
0
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1
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801
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Answer:
Answer: Detecting heterozygous deletions in NGS sequence data
13 months ago by
cmdcolin
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0
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0
replies
905
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Comment:
Comment: Error parsing strand (?) from GFF line
13 months ago by
cmdcolin
★ 3.8k
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1
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1.1k
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Comment:
Comment: RNA Sequencing and Vg pan -transcriptome build
13 months ago by
cmdcolin
★ 3.8k
1
vote
1
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2.2k
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Comment:
Comment: How to perform synteny alignments and plots only with a gene?
13 months ago by
cmdcolin
★ 3.8k
3
votes
1
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2.2k
views
Answer:
Answer: How to perform synteny alignments and plots only with a gene?
13 months ago by
cmdcolin
★ 3.8k
0
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0
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1.2k
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Comment:
Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
14 months ago by
cmdcolin
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0
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1
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1.2k
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Comment:
Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
14 months ago by
cmdcolin
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0
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1
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1.2k
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Answer:
Answer: How to remove homozygous reference genotypes from multi-sample vcf file based on
14 months ago by
cmdcolin
★ 3.8k
2
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0
replies
1.0k
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Answer:
Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
14 months ago by
cmdcolin
★ 3.8k
4
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1
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1.5k
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Answer:
Answer: Realigning BAM files to new reference
14 months ago by
cmdcolin
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0
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1
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1.0k
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Comment:
Comment: what does total count mean at a location in IGV
14 months ago by
cmdcolin
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2
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1
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2.5k
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Answer:
Answer: Rust bioinformatics projects ideas
14 months ago by
cmdcolin
★ 3.8k
0
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1
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840
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Answer:
Answer: Alternatives to Lollipop for virus variant data
14 months ago by
cmdcolin
★ 3.8k
1
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0
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93k
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Comment:
Comment: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
14 months ago by
cmdcolin
★ 3.8k
0
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0
replies
551
views
Comment:
Comment: Visualize variants and percentage of variants from one sample of Amplicon Seq da
15 months ago by
cmdcolin
★ 3.8k
5
votes
0
replies
756
views
Tool:
BAM index visualizer - a tool for helping to understand the BAI file format
bam
15 months ago by
cmdcolin
★ 3.8k
4
votes
1
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1.1k
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Answer:
Answer: Gviz python alternative
15 months ago by
cmdcolin
★ 3.8k
1
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0
replies
2.2k
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Comment:
Comment: Mapping a small number of contigs to a reference subsequence
15 months ago by
cmdcolin
★ 3.8k
0
votes
2
replies
2.7k
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Comment:
Comment: bedGraph to bigwig
15 months ago by
cmdcolin
★ 3.8k
4
votes
1
reply
2.2k
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Answer:
Answer: Mapping a small number of contigs to a reference subsequence
15 months ago by
cmdcolin
★ 3.8k
0
votes
1
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768
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Answer:
Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
16 months ago by
cmdcolin
★ 3.8k
0
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0
replies
875
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Comment:
Comment: JBrowse on GitHub (A question about file size)
16 months ago by
cmdcolin
★ 3.8k
2
votes
1
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875
views
Answer:
Answer: JBrowse on GitHub (A question about file size)
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
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4.8k
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Answer:
Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
887
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Comment:
Comment: Extract alignment in fasta format from BAM/SAM file
16 months ago by
cmdcolin
★ 3.8k
0
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0
replies
1.2k
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Comment:
Comment: Get length of the alignment from bam file with shell
16 months ago by
cmdcolin
★ 3.8k
4
votes
2
replies
1.6k
views
Answer:
Answer: How to calculate coverage of Nanopore long read data?
8 weeks ago by
cmdcolin
★ 3.8k
0
votes
0
replies
1.2k
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Comment:
Comment: batch sequence retrieval using exon coordinates
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
971
views
Comment:
Comment: remove CIGAR strings starting with insertion
updated 16 months ago by
Ram
43k • written 16 months ago by
cmdcolin
★ 3.8k
3
votes
1
reply
971
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Answer:
Answer: remove CIGAR strings starting with insertion
16 months ago by
cmdcolin
★ 3.8k
0
votes
1
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781
views
Comment:
Comment: Gene location of both inherited gene
16 months ago by
cmdcolin
★ 3.8k
3
votes
1
reply
781
views
Answer:
Answer: Gene location of both inherited gene
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
2.0k
views
Comment:
Comment: find the mate of a read using pysam
16 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
2.0k
views
Comment:
Comment: find the mate of a read using pysam
16 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
4.6k
views
Comment:
Comment: pyCirclize - Circular visualization in Python
17 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
40k
views
Comment:
Comment: Difference Between "Mate Pair" And "Pair-End"
17 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.4k
views
Comment:
Comment: How is p-value calculated in MACS2
17 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
1.4k
views
Answer:
Answer: How is p-value calculated in MACS2
17 months ago by
cmdcolin
★ 3.8k
2
votes
1
reply
18k
views
Comment:
Comment: What are Supplementary Reads?
17 months ago by
cmdcolin
★ 3.8k
2
votes
1
reply
18k
views
Answer:
Answer: What's Supplementary Reads?
17 months ago by
cmdcolin
★ 3.8k
4
votes
1
reply
93k
views
Answer:
Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
17 months ago by
cmdcolin
★ 3.8k
1
vote
0
replies
1.1k
views
Comment:
Comment: Visualization tools for phased haplotypes
17 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.1k
views
Comment:
Comment: Visualization tools for phased haplotypes
17 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
513
views
Answer:
Answer: CNV evaluate confidence
18 months ago by
cmdcolin
★ 3.8k
3
votes
0
replies
689
views
Comment:
Comment: The Biostar Herald for Monday, November 14, 2022
18 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
1.5k
views
Comment:
Comment: How to open/work with wig or tdf files
18 months ago by
cmdcolin
★ 3.8k
1
vote
0
replies
917
views
Comment:
Comment: Databases with Genes <-> Diseases relations
19 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
917
views
Answer:
Answer: Databases with Genes <-> Diseases relations
19 months ago by
cmdcolin
★ 3.8k
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