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Comment:
Comment: Is my estimated genome coverage correct?
12 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
3.8k
views
Comment:
Comment: Finding Pdb File For Specific Transcript
12 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
793
views
Answer:
Answer: Detecting heterozygous deletions in NGS sequence data
13 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
893
views
Comment:
Comment: Error parsing strand (?) from GFF line
13 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.1k
views
Comment:
Comment: RNA Sequencing and Vg pan -transcriptome build
13 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
2.2k
views
Comment:
Comment: How to perform synteny alignments and plots only with a gene?
13 months ago by
cmdcolin
★ 3.8k
3
votes
1
reply
2.2k
views
Answer:
Answer: How to perform synteny alignments and plots only with a gene?
13 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
1.2k
views
Comment:
Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
13 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.2k
views
Comment:
Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
13 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.2k
views
Answer:
Answer: How to remove homozygous reference genotypes from multi-sample vcf file based on
13 months ago by
cmdcolin
★ 3.8k
2
votes
0
replies
1.0k
views
Answer:
Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
13 months ago by
cmdcolin
★ 3.8k
4
votes
1
reply
1.5k
views
Answer:
Answer: Realigning BAM files to new reference
13 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
997
views
Comment:
Comment: what does total count mean at a location in IGV
14 months ago by
cmdcolin
★ 3.8k
2
votes
1
reply
2.5k
views
Answer:
Answer: Rust bioinformatics projects ideas
14 months ago by
cmdcolin
★ 3.8k
0
votes
1
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837
views
Answer:
Answer: Alternatives to Lollipop for virus variant data
14 months ago by
cmdcolin
★ 3.8k
1
vote
0
replies
92k
views
Comment:
Comment: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
14 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
549
views
Comment:
Comment: Visualize variants and percentage of variants from one sample of Amplicon Seq da
15 months ago by
cmdcolin
★ 3.8k
5
votes
0
replies
750
views
Tool:
BAM index visualizer - a tool for helping to understand the BAI file format
bam
15 months ago by
cmdcolin
★ 3.8k
4
votes
1
reply
1.1k
views
Answer:
Answer: Gviz python alternative
15 months ago by
cmdcolin
★ 3.8k
1
vote
0
replies
2.2k
views
Comment:
Comment: Mapping a small number of contigs to a reference subsequence
15 months ago by
cmdcolin
★ 3.8k
0
votes
2
replies
2.6k
views
Comment:
Comment: bedGraph to bigwig
15 months ago by
cmdcolin
★ 3.8k
4
votes
1
reply
2.2k
views
Answer:
Answer: Mapping a small number of contigs to a reference subsequence
15 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
765
views
Answer:
Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
15 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
871
views
Comment:
Comment: JBrowse on GitHub (A question about file size)
15 months ago by
cmdcolin
★ 3.8k
2
votes
1
reply
871
views
Answer:
Answer: JBrowse on GitHub (A question about file size)
15 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
4.8k
views
Answer:
Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
15 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
881
views
Comment:
Comment: Extract alignment in fasta format from BAM/SAM file
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
1.2k
views
Comment:
Comment: Get length of the alignment from bam file with shell
16 months ago by
cmdcolin
★ 3.8k
4
votes
2
replies
1.6k
views
Answer:
Answer: How to calculate coverage of Nanopore long read data?
7 weeks ago by
cmdcolin
★ 3.8k
0
votes
0
replies
1.2k
views
Comment:
Comment: batch sequence retrieval using exon coordinates
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
968
views
Comment:
Comment: remove CIGAR strings starting with insertion
updated 16 months ago by
Ram
43k • written 16 months ago by
cmdcolin
★ 3.8k
3
votes
1
reply
968
views
Answer:
Answer: remove CIGAR strings starting with insertion
16 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
777
views
Comment:
Comment: Gene location of both inherited gene
16 months ago by
cmdcolin
★ 3.8k
3
votes
1
reply
777
views
Answer:
Answer: Gene location of both inherited gene
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
2.0k
views
Comment:
Comment: find the mate of a read using pysam
16 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
2.0k
views
Comment:
Comment: find the mate of a read using pysam
16 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
4.6k
views
Comment:
Comment: pyCirclize - Circular visualization in Python
16 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
40k
views
Comment:
Comment: Difference Between "Mate Pair" And "Pair-End"
16 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.4k
views
Comment:
Comment: How is p-value calculated in MACS2
17 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
1.4k
views
Answer:
Answer: How is p-value calculated in MACS2
17 months ago by
cmdcolin
★ 3.8k
2
votes
1
reply
18k
views
Comment:
Comment: What are Supplementary Reads?
17 months ago by
cmdcolin
★ 3.8k
2
votes
1
reply
18k
views
Answer:
Answer: What's Supplementary Reads?
17 months ago by
cmdcolin
★ 3.8k
4
votes
1
reply
92k
views
Answer:
Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
17 months ago by
cmdcolin
★ 3.8k
1
vote
0
replies
1.1k
views
Comment:
Comment: Visualization tools for phased haplotypes
17 months ago by
cmdcolin
★ 3.8k
0
votes
1
reply
1.1k
views
Comment:
Comment: Visualization tools for phased haplotypes
17 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
508
views
Answer:
Answer: CNV evaluate confidence
17 months ago by
cmdcolin
★ 3.8k
3
votes
0
replies
687
views
Comment:
Comment: The Biostar Herald for Monday, November 14, 2022
17 months ago by
cmdcolin
★ 3.8k
0
votes
0
replies
1.4k
views
Comment:
Comment: How to open/work with wig or tdf files
18 months ago by
cmdcolin
★ 3.8k
1
vote
0
replies
913
views
Comment:
Comment: Databases with Genes <-> Diseases relations
19 months ago by
cmdcolin
★ 3.8k
1
vote
1
reply
913
views
Answer:
Answer: Databases with Genes <-> Diseases relations
19 months ago by
cmdcolin
★ 3.8k
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