Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
1
vote
1
reply
1.7k
views
Answer: A: What causes Linear relations on MAplots?
5.1 years ago by cmdcolin ★ 3.8k
4
votes
1
reply
1.4k
views
Answer: A: Plotting MBD-seq results
5.2 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
16k
views
Answer: A: Extract reads within given region, and their mates
5.2 years ago by cmdcolin ★ 3.8k
3
votes
1
reply
4.6k
views
Answer: A: Extract read sequence from BAM files depending on the alignment coordinates
5.2 years ago by cmdcolin ★ 3.8k
2
votes
0
replies
3.1k
views
Answer: A: Finding Gene Name Synonyms
5.3 years ago by cmdcolin ★ 3.8k
0
votes
1
reply
4.5k
views
Answer: A: how to extract per base information (in coverage track of IGV) from .bam file
5.3 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
5.4k
views
Answer: A: samtools covert to bam, sort and index all gz.sam
5.3 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
1.8k
views
Answer: A: strand identification from sam file
5.3 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
1.2k
views
Answer: A: Is there a standard file format for anchored contigs?
5.3 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
4.2k
views
Answer: A: Full genome phyloP scores from UCSC Browser
5.4 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
5.5k
views
Answer: A: Failed to populate reference for id 1?
5.4 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
6.7k
views
Answer: A: Extracting Read Pairs From Region So That All Pairs Remain Intact
5.5 years ago by cmdcolin ★ 3.8k
3
votes
0
replies
25k
views
Answer: A: How To Convert Blast Results To Gff
updated 5.7 years ago by 43k • written 8.3 years ago by ★ 3.8k
2
votes
1
reply
3.3k
views
Answer: A: How do I filter my VCF file to only include certain coordinates from a BED file?
5.7 years ago by cmdcolin ★ 3.8k
4
votes
1
reply
2.2k
views
Answer: A: parsing gff3 file
5.8 years ago by cmdcolin ★ 3.8k
0
votes
1
reply
1.4k
views
Answer: A: How to customize the looks of dynamically generated tracks in jbrowse?
updated 5.8 years ago by 7.5k • written 5.8 years ago by ★ 3.8k
0
votes
0
replies
1.8k
views
Answer: A: Can a JBrowse track be downloaded?
5.8 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
6.5k
views
Answer: A: How to order a gff3 file by coordinates
5.8 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
2.4k
views
Answer: A: Web apollo installation not working
5.8 years ago by cmdcolin ★ 3.8k
4
votes
1
reply
6.5k
views
Answer: A: Interesting/useful/beautiful bio sequence viz tools
6.1 years ago by cmdcolin ★ 3.8k
2
votes
1
reply
6.4k
views
Answer: C: Samtools faidx problem
6.3 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
2.9k
views
Answer: A: Add gene annotation/information to CNV plot in R
6.5 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
9.2k
views
Answer: A: [E::hts_idx_push] chromosome blocks not continuous :Indexing of gff3 files using
6.7 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
7.0k
views
Answer: A: List of np-hard problems in biology/bioinformatics
6.8 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
2.3k
views
Answer: A: retrieve genomic coordinate on mRNA
6.8 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
38k
views
Answer: A: Efficient And Fastest Way To Sort Large (>100Gb) Bam Files?
6.9 years ago by cmdcolin ★ 3.8k
2
votes
1
reply
2.4k
views
Answer: A: Rescaffolding a genome assembly?
6.9 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
3.6k
views
Answer: A: Could someone suggest a fast and efficient implementation of a glocal (semi-glob
6.9 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
4.8k
views
Answer: A: Mapping between genomic coordinates to transcriptomic coordinates
6.9 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
3.4k
views
Answer: A: from GI or protein ID to genome coordinates
6.9 years ago by cmdcolin ★ 3.8k
1
vote
2
replies
39k
views
Answer: Answer: How To Retrieve Genbank Records With Range Of Accession Numbers
2.0 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
5.9k
views
Answer: A: Creating a dotplot from LASTZ output
7.0 years ago by cmdcolin ★ 3.8k
3
votes
0
replies
2.2k
views
Answer: A: Reshape tabular data frame to wide format
7.0 years ago by cmdcolin ★ 3.8k
0
votes
2
replies
5.7k
views
Answer: A: Get LD data for any two SNPs
7.0 years ago by cmdcolin ★ 3.8k
1
vote
1
reply
2.4k
views
Answer: A: How to embed genome browser in a web site?
7.1 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
2.5k
views
Answer: A: Software for visualising GWAS results
7.2 years ago by cmdcolin ★ 3.8k
4
votes
1
reply
3.2k
views
Answer: A: Visualization of maf alignments in JBrowse
7.2 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
4.9k
views
Answer: A: Extracting entries from GTF file
7.3 years ago by cmdcolin ★ 3.8k
0
votes
1
reply
2.7k
views
Answer: A: install augustus on MAC
7.3 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
5.9k
views
Answer: A: Best way to create a multi-sample VCF
7.3 years ago by cmdcolin ★ 3.8k
1
vote
0
replies
4.6k
views
Answer: A: install bioawk in unix system
7.3 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
1.8k
views
Answer: A: Display Fastaq data on JBrowse
7.4 years ago by cmdcolin ★ 3.8k
2
votes
1
reply
3.1k
views
Answer: A: How to integrate JBrowse with Django
7.7 years ago by cmdcolin ★ 3.8k
0
votes
0
replies
2.2k
views
Answer: A: Linking To A Specific Genome In Jbrowse
7.7 years ago by cmdcolin ★ 3.8k
2
votes
0
replies
17k
views
Answer: A: Visualisation Of Alternative Splicing Events Using Rna-Seq Data
7.7 years ago by cmdcolin ★ 3.8k
1
vote
2
replies
3.4k
views
Answer: A: Portable genome browser
7.7 years ago by cmdcolin ★ 3.8k
2
votes
1
reply
13k
views
Answer: Answer: tabix indexing issue
updated 21 months ago by 43k • written 8.2 years ago by ★ 3.8k
5
votes
0
replies
5.6k
views
Answer: Answer: ipython notebooks on bioinformatics and genomics
updated 17 months ago by 43k • written 8.8 years ago by ★ 3.8k
0
votes
1
reply
5.0k
views
Answer: Answer: Creating Annotations using Computational Results in Apollo. Broader questions re
updated 16 months ago by 43k • written 8.9 years ago by ★ 3.8k
3
votes
2
replies
5.1k
views
Answer: Answer: item's end higher than chrom size, wigToBigWig
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 3.8k
151 results • Page 3 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6