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Answer: Answer: The best factors to evaluate the quality of de novo transcriptome assembly
updated 3.3 years ago by 45k • written 10.6 years ago by ★ 2.2k
2
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0
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3.7k
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Answer: Answer: The "perils" of using content from Biostars
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
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0
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Answer: Answer: converting a fasta database to blastp database
updated 3.5 years ago by 45k • written 10.6 years ago by ★ 2.2k
2
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0
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20k
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Answer: Answer: Trimmomatic not removing TruSeq3 adapters
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
0
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1
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5.5k
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Answer: Answer: De novo assembly for virus genome with Velvet.
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
4
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1
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2.1k
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News: NCBI BLAST URL domain changes to take effect December 1, 2014
blast ncbi
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
0
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0
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Comment: C: What should be the minimum 454 read (single-end) length for de novo assembly run
10.6 years ago by rtliu ★ 2.2k
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0
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2.1k
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Answer: Answer: How much computing resources does an ABySS run take
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
8
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1
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18k
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Answer: Answer: Best software to assemble bacterial genomes
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
1
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0
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5.0k
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Answer: Answer: memory requirments of velvet tool (de novo assembly)
updated 3.6 years ago by 45k • written 10.7 years ago by ★ 2.2k
0
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1
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4.4k
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Comment: Comment: FASTQC can't detect short overrepresented sequences (e.g., less than 25 bp)?
updated 3.4 years ago by 45k • written 10.7 years ago by ★ 2.2k
0
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1
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2.3k
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Comment: Comment: in-house blast DB creation
updated 3.6 years ago by 45k • written 10.7 years ago by ★ 2.2k
3
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1
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2.3k
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Answer: Answer: in-house blast DB creation
updated 3.6 years ago by 45k • written 10.7 years ago by ★ 2.2k
2
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0
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4.0k
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Answer: Answer: Suggested genome assembly workshop
updated 3.4 years ago by 45k • written 10.7 years ago by ★ 2.2k
0
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1
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6.4k
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Comment: Comment: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 3.4 years ago by 45k • written 10.7 years ago by ★ 2.2k
1
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1
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6.4k
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Comment: Comment: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 3.4 years ago by 45k • written 10.7 years ago by ★ 2.2k
2
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1
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6.4k
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Answer: Answer: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 3.5 years ago by 45k • written 10.7 years ago by ★ 2.2k
1
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1
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12k
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Answer: Answer: scaffolds and contigs SPADES
updated 3.4 years ago by 45k • written 10.7 years ago by ★ 2.2k
3
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0
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3.5k
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Answer: Answer: paired-reads assembly problem with so many contigs
updated 3.5 years ago by 45k • written 10.8 years ago by ★ 2.2k
1
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0
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3.8k
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Answer: Answer: PacBio Technology Assemblers
updated 3.5 years ago by 45k • written 10.8 years ago by ★ 2.2k
1
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0
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4.1k
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Answer: Answer: Mitochondrial denovo assembly
updated 3.5 years ago by 45k • written 10.8 years ago by ★ 2.2k
0
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0
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7.3k
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Comment: Comment: How come that the Trinity assembler seems to work on a computer with low memory
updated 3.5 years ago by 45k • written 10.8 years ago by ★ 2.2k
2
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1
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5.9k
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Answer: A: What input does blastdb_aliastool need?
10.8 years ago by rtliu ★ 2.2k
1
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1
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4.4k
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Answer: Answer: Process 50k+ sequences with Blastx for Blast2Go
updated 3.6 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
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0
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3.0k
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Answer: Answer: SOAPdenovo assembly question
updated 3.5 years ago by 45k • written 10.8 years ago by ★ 2.2k
22
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10
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6.3k
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News: samtools/bcftools/htslib 1.0 released
htslib samtools bcftools
updated 3.6 years ago by 45k • written 10.9 years ago by ★ 2.2k
0
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0
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3.2k
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Answer: Answer: Missing forward library error in MaSuRCA run
updated 3.6 years ago by 45k • written 10.9 years ago by ★ 2.2k
1
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0
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2.2k
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News: Free edX Course - Introduction to Linux - Start August 1, 2014
Linux Linux-Foundation
updated 3.6 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
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0
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4.4k
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Comment: C: Process 50k+ sequences with Blastx for Blast2Go
11.0 years ago by rtliu ★ 2.2k
1
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0
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5.1k
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Comment: C: Questions about MaSuRCA assembly program
11.0 years ago by rtliu ★ 2.2k
4
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1
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5.1k
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Answer: Answer: Questions about MaSuRCA assembly program
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 2.2k
2
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1
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16k
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Answer: Answer: FastQ quality check : what can we correct ?
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 2.2k
6
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1
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2.8k
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News: FastQC Version 0.11.1 released
genome next-gen-sequencing
updated 2.3 years ago by 45k • written 11.1 years ago by ★ 2.2k
6
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1
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3.0k
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Answer: A: What are the important information should we know about RNA-seq data file before
11.2 years ago by rtliu ★ 2.2k
3
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0
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4.7k
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News: Free Online Harvardx Course, Data Analysis For Genomics, Starts April 7
methylation bioconductor ChIP-seq RNA-seq R
updated 2.4 years ago by 45k • written 11.3 years ago by ★ 2.2k
0
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0
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7.5k
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Answer: A: Plant Annotation Workflow
11.3 years ago by rtliu ★ 2.2k
3
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1
reply
9.4k
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Answer: A: Illumina-Fastq To Sanger-Fastq Conversion
11.6 years ago by rtliu ★ 2.2k
18
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2
replies
40k
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Answer: Answer: Best Way To Normalize Rna-Seq Data For Expression Profiling
updated 3.6 years ago by 45k • written 11.6 years ago by ★ 2.2k
0
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1
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18k
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Answer: A: Finding Adapters For Illumina Reads
11.6 years ago by rtliu ★ 2.2k
2
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1
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3.5k
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Answer: A: Trinity Question
11.8 years ago by rtliu ★ 2.2k
0
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0
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5.0k
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Comment: C: Paired-End Overlapping With Error Correction - Which Is Better?
11.8 years ago by rtliu ★ 2.2k
2
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1
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5.0k
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Answer: A: Paired-End Overlapping With Error Correction - Which Is Better?
11.8 years ago by rtliu ★ 2.2k
0
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0
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3.4k
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Answer: A: Masurca Cannot Create Assemble.Sh File
11.9 years ago by rtliu ★ 2.2k
0
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0
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5.4k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.9 years ago by rtliu ★ 2.2k
0
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1
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5.4k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.9 years ago by rtliu ★ 2.2k
0
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1
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5.4k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.9 years ago by rtliu ★ 2.2k
0
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1
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5.4k
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Answer: A: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.9 years ago by rtliu ★ 2.2k
4
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0
replies
43k
views
Answer: Answer: Where To Look For Quality Bioinformatics Short Courses And Workshops?
updated 4.1 years ago by 45k • written 11.9 years ago by ★ 2.2k
1
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1
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8.8k
views
Answer: A: Masurca Error With Illumina Assembly
12.0 years ago by rtliu ★ 2.2k
2
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0
replies
7.0k
views
Answer: A: Automated Microbial Gene Prediction From Assembled Genomes -- What Is The Latest
12.2 years ago by rtliu ★ 2.2k
101 results • Page 2 of 3
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