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Comment: C: How can I remove the outliers from a boxplot and fill the groups?
5.1 years ago by dpc ▴ 250
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3.7k
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Comment: C: How to extract out specific distances from a distance matrix?
5.1 years ago by dpc ▴ 250
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0
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3.7k
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Comment: C: How to extract out specific distances from a distance matrix?
5.1 years ago by dpc ▴ 250
1
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5
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1.4k
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How can I extract out lines that contains 'g__' at their end along with the first two line headers? (i.e. only the genus level OTU from metaphlan out…
bash command
5.1 years ago by dpc ▴ 250
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1.4k
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Comment: C: How can I extract out lines that contains 'g__' at their end? (i.e. only the gen
5.1 years ago by dpc ▴ 250
0
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1
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1.4k
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Comment: C: How can I extract out lines that contains 'g__' at their end? (i.e. only the gen
5.1 years ago by dpc ▴ 250
0
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1
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3.7k
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Comment: C: How to extract out specific distances from a distance matrix?
5.1 years ago by dpc ▴ 250
3
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7
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2.6k
views
Can I use pseudocounts for differential abundance of OTUs?
deseq
updated 5.1 years ago by 3.4k • written 5.1 years ago by ▴ 250
3
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9
replies
3.7k
views
How to extract out specific distances from a distance matrix?
wgs phyloseq
updated 5.1 years ago by 3.4k • written 5.1 years ago by ▴ 250
0
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0
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10k
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Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
0
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0
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3.7k
views
Comment: C: How to extract out specific distances from a distance matrix?
5.1 years ago by dpc ▴ 250
0
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1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
1
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1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
2
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1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
1
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1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
0
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1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
2
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2
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10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
1
vote
1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.1 years ago by dpc ▴ 250
0
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1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.2 years ago by dpc ▴ 250
0
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1
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10k
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Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.2 years ago by dpc ▴ 250
1
vote
1
reply
10k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
5.2 years ago by dpc ▴ 250
2
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2
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7.0k
views
How to extract to columns from a phyloseq sample_data object?
phyloseq
updated 5.2 years ago by 3.4k • written 5.2 years ago by ▴ 250
25
votes
25
replies
10k
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How to generate Beta diversity boxplot from phyloseq object?
phyloseq beta diversity metagenomics
5.2 years ago by dpc ▴ 250
0
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1
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9.1k
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Comment: C: METAPHLAN: Relative abundance to read count
5.2 years ago by dpc ▴ 250
5
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4
replies
1.9k
views
bash script for catenating many paired end files
catenation
updated 5.2 years ago by ★ 1.7k • written 5.2 years ago by ▴ 250
0
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1
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9.1k
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Comment: C: METAPHLAN: Relative abundance to read count
5.2 years ago by dpc ▴ 250
0
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0
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9.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
5.2 years ago by dpc ▴ 250
0
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1
reply
3.1k
views
Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
5.2 years ago by dpc ▴ 250
0
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0
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3.1k
views
Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
5.2 years ago by dpc ▴ 250
0
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1
reply
9.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
5.2 years ago by dpc ▴ 250
0
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1
reply
9.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
5.2 years ago by dpc ▴ 250
0
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1
reply
3.1k
views
Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
5.2 years ago by dpc ▴ 250
0
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0
replies
2.0k
views
Comment: C: Extract out lines with 's__' into a new file together with first two lines of th
5.2 years ago by dpc ▴ 250
5
votes
14
replies
9.1k
views
METAPHLAN: Relative abundance to read count
metaphlan phyloseq
updated 5.2 years ago by 3.4k • written 5.2 years ago by ▴ 250
0
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1
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2.0k
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Comment: C: Extract out lines with 's__' into a new file together with first two lines of th
5.2 years ago by dpc ▴ 250
3
votes
8
replies
2.0k
views
Extract out lines with 's__' into a new file together with first two lines of the file
command grep
updated 5.2 years ago by 3.4k • written 5.2 years ago by ▴ 250
0
votes
0
replies
885
views
Can I analyse my metagenome profiled data with "Curated Metagenomic Data pipeline"?
metaphlan curated metagenomic data
5.2 years ago by dpc ▴ 250
0
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1
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2.3k
views
Comment: C: ERROR in QIIME
5.2 years ago by dpc ▴ 250
0
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1
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2.3k
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Comment: C: ERROR in QIIME
5.2 years ago by dpc ▴ 250
0
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1
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3.0k
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Comment: C: Smart BLAST or only BLAST?
5.2 years ago by dpc ▴ 250
0
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3
replies
3.0k
views
Smart BLAST or only BLAST?
blast protein sequence alignment
5.2 years ago by dpc ▴ 250
0
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1
reply
869
views
protein blast from amino acid sequences
BLAST sequence alignment phylogenetic analysis
updated 5.2 years ago by ★ 30k • written 5.2 years ago by ▴ 250
1
vote
5
replies
2.3k
views
ERROR in QIIME
qiime biom merge
5.2 years ago by dpc ▴ 250
0
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1
reply
7.2k
views
Comment: C: Import metaphlan output to phyloseq
5.2 years ago by dpc ▴ 250
0
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0
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12k
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Comment: C: Diversity analysis after metaphlan2
5.2 years ago by dpc ▴ 250
0
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1
reply
7.2k
views
Comment: C: Import metaphlan output to phyloseq
5.2 years ago by dpc ▴ 250
0
votes
1
reply
7.2k
views
Comment: C: Import metaphlan output to phyloseq
5.2 years ago by dpc ▴ 250
0
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1
reply
7.2k
views
Comment: C: Import metaphlan output to phyloseq
5.2 years ago by dpc ▴ 250
3
votes
13
replies
7.2k
views
Import metaphlan output to phyloseq
metaphlan phyloseq wgs metagenome
updated 5.2 years ago by 45k • written 5.2 years ago by ▴ 250
0
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1
reply
2.5k
views
Comment: C: Density vs gene count plot
5.2 years ago by dpc ▴ 250
179 results • Page 2 of 4
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