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Comment: C: How can I remove the outliers from a boxplot and fill the groups?
3.8 years ago by dpc ▴ 240
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2.6k
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Comment: C: How to extract out specific distances from a distance matrix?
3.8 years ago by dpc ▴ 240
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2.6k
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Comment: C: How to extract out specific distances from a distance matrix?
3.8 years ago by dpc ▴ 240
1
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5
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1.0k
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How can I extract out lines that contains 'g__' at their end along with the first two line headers? (i.e. only the genus level OTU from metaphlan out…
bash command
3.8 years ago by dpc ▴ 240
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Comment: C: How can I extract out lines that contains 'g__' at their end? (i.e. only the gen
3.8 years ago by dpc ▴ 240
0
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1
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1.0k
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Comment: C: How can I extract out lines that contains 'g__' at their end? (i.e. only the gen
3.8 years ago by dpc ▴ 240
0
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1
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2.6k
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Comment: C: How to extract out specific distances from a distance matrix?
3.8 years ago by dpc ▴ 240
3
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7
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1.9k
views
Can I use pseudocounts for differential abundance of OTUs?
deseq
updated 3.8 years ago by 3.2k • written 3.8 years ago by ▴ 240
3
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9
replies
2.6k
views
How to extract out specific distances from a distance matrix?
wgs phyloseq
updated 3.8 years ago by 3.2k • written 3.8 years ago by ▴ 240
0
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0
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8.1k
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Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
0
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0
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2.6k
views
Comment: C: How to extract out specific distances from a distance matrix?
3.8 years ago by dpc ▴ 240
0
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1
reply
8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
1
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1
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8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
2
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1
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8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
1
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1
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8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
0
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1
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8.1k
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Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
2
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2
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8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
1
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1
reply
8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
0
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1
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8.1k
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Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
0
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1
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8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
1
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1
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8.1k
views
Comment: C: How to generate Beta diversity boxplot from phyloseq object?
3.8 years ago by dpc ▴ 240
2
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2
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5.4k
views
How to extract to columns from a phyloseq sample_data object?
phyloseq
updated 3.8 years ago by 3.2k • written 3.8 years ago by ▴ 240
24
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25
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8.1k
views
How to generate Beta diversity boxplot from phyloseq object?
phyloseq beta diversity metagenomics
3.8 years ago by dpc ▴ 240
0
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1
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6.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
3.8 years ago by dpc ▴ 240
5
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4
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1.4k
views
bash script for catenating many paired end files
catenation
updated 3.8 years ago by ★ 1.5k • written 3.8 years ago by ▴ 240
0
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1
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6.1k
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Comment: C: METAPHLAN: Relative abundance to read count
3.8 years ago by dpc ▴ 240
0
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0
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6.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
3.8 years ago by dpc ▴ 240
0
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1
reply
2.2k
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Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
3.8 years ago by dpc ▴ 240
0
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0
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2.2k
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Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
3.8 years ago by dpc ▴ 240
0
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1
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6.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
3.8 years ago by dpc ▴ 240
0
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1
reply
6.1k
views
Comment: C: METAPHLAN: Relative abundance to read count
3.8 years ago by dpc ▴ 240
0
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1
reply
2.2k
views
Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
3.8 years ago by dpc ▴ 240
0
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0
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1.3k
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Comment: C: Extract out lines with 's__' into a new file together with first two lines of th
3.8 years ago by dpc ▴ 240
5
votes
14
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6.1k
views
METAPHLAN: Relative abundance to read count
metaphlan phyloseq
updated 3.8 years ago by 3.2k • written 3.8 years ago by ▴ 240
0
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1
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1.3k
views
Comment: C: Extract out lines with 's__' into a new file together with first two lines of th
3.8 years ago by dpc ▴ 240
3
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8
replies
1.3k
views
Extract out lines with 's__' into a new file together with first two lines of the file
command grep
updated 3.8 years ago by 3.2k • written 3.8 years ago by ▴ 240
0
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0
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657
views
Can I analyse my metagenome profiled data with "Curated Metagenomic Data pipeline"?
metaphlan curated metagenomic data
3.8 years ago by dpc ▴ 240
0
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1
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1.7k
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Comment: C: ERROR in QIIME
3.8 years ago by dpc ▴ 240
0
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1
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1.7k
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Comment: C: ERROR in QIIME
3.8 years ago by dpc ▴ 240
0
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1
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2.1k
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Comment: C: Smart BLAST or only BLAST?
3.8 years ago by dpc ▴ 240
0
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3
replies
2.1k
views
Smart BLAST or only BLAST?
blast protein sequence alignment
3.8 years ago by dpc ▴ 240
0
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1
reply
624
views
protein blast from amino acid sequences
BLAST sequence alignment phylogenetic analysis
updated 3.8 years ago by ★ 27k • written 3.8 years ago by ▴ 240
1
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5
replies
1.7k
views
ERROR in QIIME
qiime biom merge
3.8 years ago by dpc ▴ 240
0
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1
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5.5k
views
Comment: C: Import metaphlan output to phyloseq
3.8 years ago by dpc ▴ 240
0
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0
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12k
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Comment: C: Diversity analysis after metaphlan2
3.8 years ago by dpc ▴ 240
0
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1
reply
5.5k
views
Comment: C: Import metaphlan output to phyloseq
3.8 years ago by dpc ▴ 240
0
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1
reply
5.5k
views
Comment: C: Import metaphlan output to phyloseq
3.8 years ago by dpc ▴ 240
0
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1
reply
5.5k
views
Comment: C: Import metaphlan output to phyloseq
3.8 years ago by dpc ▴ 240
3
votes
13
replies
5.5k
views
Import metaphlan output to phyloseq
metaphlan phyloseq wgs metagenome
updated 3.8 years ago by 43k • written 3.8 years ago by ▴ 240
0
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1
reply
2.0k
views
Comment: C: Density vs gene count plot
3.8 years ago by dpc ▴ 240
179 results • Page 2 of 4
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