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Comment: C: How I can study cross-talk from two different tissue using gene expression profi
3.6 years ago by Shalu Jhanwar ▴ 520
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Answer: A: Retrieve Protein Sequences from Uniprot
3.6 years ago by Shalu Jhanwar ▴ 520
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Answer: A: checking overlap between two genomic coordinates
3.7 years ago by Shalu Jhanwar ▴ 520
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22k
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Answer: A: How to Make Dot Plots of GO Terms?
3.7 years ago by Shalu Jhanwar ▴ 520
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1.3k
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Answer: A: Phred qual error after fastq trimming
3.7 years ago by Shalu Jhanwar ▴ 520
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1.0k
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Answer: A: Extracting rows on basis of specific column values in R
3.7 years ago by Shalu Jhanwar ▴ 520
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Answer: A: Using rsem-calculate-expression and STAR: invalid number of arguments?
3.7 years ago by Shalu Jhanwar ▴ 520
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1.5k
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Answer: A: Gene Ontology Database
3.7 years ago by Shalu Jhanwar ▴ 520
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0
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790
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Answer: A: multi species_gene name to description
3.7 years ago by Shalu Jhanwar ▴ 520
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981
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Answer: A: New to NGS
3.7 years ago by Shalu Jhanwar ▴ 520
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1
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666
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Answer: A: How to correct a wrong protein extraction from FASTA file?
3.7 years ago by Shalu Jhanwar ▴ 520
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803
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Answer: A: Which multiple sequence alignment algorithm should be used for small dataset?
3.7 years ago by Shalu Jhanwar ▴ 520
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719
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Answer: A: Custom reference genome for hybride mouse
3.7 years ago by Shalu Jhanwar ▴ 520
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899
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Answer: A: Question about annotation file
3.7 years ago by Shalu Jhanwar ▴ 520
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141k
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Comment: A: The Biostar Handbook. A bioinformatics e-book for beginners.
3.7 years ago by Shalu Jhanwar ▴ 520
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1
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837
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Comment: C: Monoallelic expression datasets (high-throughput sequencing)
3.7 years ago by Shalu Jhanwar ▴ 520
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837
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Answer: A: Monoallelic expression datasets (high-throughput sequencing)
3.7 years ago by Shalu Jhanwar ▴ 520
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2.9k
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Comment: C: How to put CutAdapt in path for running TrimGalore?
3.7 years ago by Shalu Jhanwar ▴ 520
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2
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2.9k
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Answer: A: How to put CutAdapt in path for running TrimGalore?
3.7 years ago by Shalu Jhanwar ▴ 520
2
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1
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6.5k
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Answer: A: How to add column to table with awk
3.7 years ago by Shalu Jhanwar ▴ 520
2
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0
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2.1k
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Answer: A: Which tool is most popular for GO over-representation analysis?
3.7 years ago by Shalu Jhanwar ▴ 520
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1.4k
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Comment: C: FireBrowse TCGA data files
3.7 years ago by Shalu Jhanwar ▴ 520
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2
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1.4k
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Answer: A: FireBrowse TCGA data files
3.7 years ago by Shalu Jhanwar ▴ 520
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1
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1.4k
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Comment: C: FireBrowse TCGA data files
3.7 years ago by Shalu Jhanwar ▴ 520
2
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1
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1.0k
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Answer: A: Network Analysis of Each Cluster of Protein Interaction Network
3.7 years ago by Shalu Jhanwar ▴ 520
3
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2
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1.9k
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Answer: A: Download the promoter, enchancer, TSS , 3 prime, exon and intron positions of al
3.7 years ago by Shalu Jhanwar ▴ 520
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3.7k
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Answer: A: Phylogenetic analysis for large size fasta sequences
3.7 years ago by Shalu Jhanwar ▴ 520
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0
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4.8k
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Answer: A: BlastP vs BlastX
3.7 years ago by Shalu Jhanwar ▴ 520
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0
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2.2k
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Answer: A: Understanding the output from HTseq-count
3.7 years ago by Shalu Jhanwar ▴ 520
2
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1
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748
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Answer: A: To get correlation of different ChIP-seq samples
3.7 years ago by Shalu Jhanwar ▴ 520
1
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2
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2.7k
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Answer: A: featureCounts, GZIP ERROR:-2
3.7 years ago by Shalu Jhanwar ▴ 520
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0
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1.5k
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Answer: A: how Creat un-aligne file with bowtie?
3.7 years ago by Shalu Jhanwar ▴ 520
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1
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2.6k
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Comment: C: Full GTF file vs Subset GTF file
3.7 years ago by Shalu Jhanwar ▴ 520
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0
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1.1k
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Answer: A: DESeq2 for Differential gene expression
3.7 years ago by Shalu Jhanwar ▴ 520
1
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1
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2.6k
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Answer: A: Full GTF file vs Subset GTF file
3.7 years ago by Shalu Jhanwar ▴ 520
1
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0
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2.0k
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Answer: A: Software suggestion for RRBS DMR (methylation) analysis?
3.8 years ago by Shalu Jhanwar ▴ 520
2
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0
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5.2k
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Answer: A: Find Orthologs On Biomart
3.8 years ago by Shalu Jhanwar ▴ 520
3
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0
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1.2k
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Answer: A: Whole Genome Sequencing Data Annotation
3.8 years ago by Shalu Jhanwar ▴ 520
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0
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1.0k
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Answer: A: Platanus: command not found
3.8 years ago by Shalu Jhanwar ▴ 520
1
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1
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1.8k
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Answer: A: Error in reading expression matrix
3.8 years ago by Shalu Jhanwar ▴ 520
1
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1
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3.9k
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Answer: A: High rate of "Aligned concordantly >1 times:"
3.8 years ago by Shalu Jhanwar ▴ 520
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2.7k
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Comment: A: Is it possible to identify different expressed genes by using TPM?
updated 3.8 years ago by 43k • written 3.8 years ago by ▴ 520
2
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0
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1.0k
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Answer: A: Failed to merge BAM files
3.8 years ago by Shalu Jhanwar ▴ 520
1
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0
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1.9k
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Answer: A: Converting RPKM into counts
3.8 years ago by Shalu Jhanwar ▴ 520
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1
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3.7k
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Answer: A: Using DESeq2 for time-series analysis
3.8 years ago by Shalu Jhanwar ▴ 520
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0
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1.9k
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Comment: C: Running linux command macs2 in R error
3.8 years ago by Shalu Jhanwar ▴ 520
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1
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1.9k
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Answer: A: Running linux command macs2 in R error
3.8 years ago by Shalu Jhanwar ▴ 520
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0
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1.0k
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Answer: A: Submitting Genemark annotation to Genbank
3.8 years ago by Shalu Jhanwar ▴ 520
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1
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1.5k
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Answer: A: Annotation of non model fish (mahi mahi) genome
3.8 years ago by Shalu Jhanwar ▴ 520
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0
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1.0k
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Comment: A: venn diagram of rna seq and microarray datasets
3.8 years ago by Shalu Jhanwar ▴ 520
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