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1
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3
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How to RMA normalize microarray expression data only without the CEL files?
microarray oligo affy rma
3.3 years ago by Microuser • 0
2
votes
4
replies
921
views
Problem with downloading full microarray datasets with getGEO function
GEOquery microarray
updated 3.3 years ago by 87k • written 3.3 years ago by • 0
7
votes
5
replies
9.0k
views
Which of PCA or Heatmap plots are better to exclude outlier replicates from normalised microarray or similar datasets?
microarray outlier pca heatmap
updated 3.3 years ago by ★ 27k • written 3.3 years ago by • 0
0
votes
1
reply
1.4k
views
Error at cemitool function to get expression data/CEMiTool
cemitool
updated 3.7 years ago by ▴ 50 • written 3.7 years ago by • 0
8
votes
8
replies
3.4k
views
Convert gene ID to gene name/symbol in gene set file (GMT)
GMT geneset
updated 3.7 years ago by 87k • written 3.7 years ago by • 0
0
votes
0
replies
571
views
Standard deviation versus rank of the mean plot/microarray quality assessment
arrayQualityMetrics microarray
3.7 years ago by Microuser • 0
1
vote
1
reply
907
views
Finding outlier replicates of PCA plot
microarray pca
updated 3.7 years ago by 13k • written 3.7 years ago by • 0
0
votes
1
reply
980
views
Problem in RMA normalization (Microarray Affymetrix)
Microarray RMA Affybatch Oligo
updated 3.8 years ago by 20 • written 3.8 years ago by • 0
0
votes
1
reply
720
views
How to correctly assign the matrix row for DGE analysis?
limma makecontrasts microarray dge matrix
3.8 years ago by Microuser • 0
3
votes
1
reply
2.2k
views
Cannot read CEL files
microarray cel
updated 3.8 years ago by 87k • written 3.8 years ago by • 0
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