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Comment: Comment: Deseq2/ComplexHeatmap - is it possible to combine 4 heatmaps together?
2.6 years ago by rpolicastro 13k
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Comment: Comment: normalize coordinates to the same length
2.6 years ago by rpolicastro 13k
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1.5k
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Comment: Comment: normalize coordinates to the same length
2.6 years ago by rpolicastro 13k
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Answer: Answer: remove batch effect
2.6 years ago by rpolicastro 13k
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1.9k
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Comment: Comment: Is it possible to draw volcano plot without p values
2.6 years ago by rpolicastro 13k
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Comment: Comment: Seqtk
2.6 years ago by rpolicastro 13k
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Comment: Comment: Getting chromosome of unusual chromosome names e.g. 'CHR_HSCHR8_8_CTG1'
2.6 years ago by rpolicastro 13k
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Comment: Comment: Regression factor levels question
2.6 years ago by rpolicastro 13k
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785
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Comment: Comment: Regression factor levels question
2.6 years ago by rpolicastro 13k
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Comment: Comment: R package for functional enrichment and depletion analysis
2.6 years ago by rpolicastro 13k
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1.4k
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Answer: Answer: Transmictomic analysis with draft reference genome
2.6 years ago by rpolicastro 13k
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1.4k
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Comment: Comment: Transmictomic analysis with draft reference genome
2.6 years ago by rpolicastro 13k
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Answer: Answer: Creating binary matrix of absence/presence of genes in multiple column lists
2.6 years ago by rpolicastro 13k
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Answer: Answer: how to rename or time bunch of file names in fasta file
2.6 years ago by rpolicastro 13k
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Answer: Answer: My keys are all ENSEMBL, but R says they are not valid keys for ENSEMBL
2.6 years ago by rpolicastro 13k
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1.4k
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Answer: Answer: R package for functional enrichment and depletion analysis
2.6 years ago by rpolicastro 13k
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1.1k
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Comment: Comment: Suggestion for approaching multiple conditions scRNA-seq
2.6 years ago by rpolicastro 13k
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816
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Comment: Comment: how to import hdf5 Hi-C data into R using HiTC package
2.6 years ago by rpolicastro 13k
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1
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1.8k
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Comment: Comment: Plot heatmap using row_splitting but splitting should based on a column in data
2.6 years ago by rpolicastro 13k
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1
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1.8k
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Comment: Comment: Plot heatmap using row_splitting but splitting should based on a column in data
2.6 years ago by rpolicastro 13k
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1
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2.5k
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Comment: Comment: Bad quality fastq files for analysis
2.6 years ago by rpolicastro 13k
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778
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Comment: Comment: Combining RNAseq datasets
2.6 years ago by rpolicastro 13k
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1.8k
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Comment: Comment: Languages for Bioinformatics
2.6 years ago by rpolicastro 13k
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915
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Comment: Comment: A way to find which genome builds a package supports
2.6 years ago by rpolicastro 13k
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Comment: Comment: calculating down-regulated and upregulated genes from a set of values
2.6 years ago by rpolicastro 13k
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1.0k
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Comment: Comment: calculating down-regulated and upregulated genes from a set of values
2.6 years ago by rpolicastro 13k
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1.6k
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Comment: Comment: Between sample normalization with replicates
2.6 years ago by rpolicastro 13k
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982
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Comment: Comment: Integrating single-nucleus RNA-seq and single-cell RNA-seq datasets
2.6 years ago by rpolicastro 13k
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1.9k
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Comment: Comment: How to make line graph with circles in R
2.6 years ago by rpolicastro 13k
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3.2k
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Comment: Comment: How to convert hard-masked genome to soft-masked?
2.7 years ago by rpolicastro 13k
4
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3.2k
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Answer: Answer: How to convert hard-masked genome to soft-masked?
2.7 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: Aggregating multiple 10 X samples count matrices into one before analysis.
2.7 years ago by rpolicastro 13k
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2.9k
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Comment: Comment: WGCNA number of modules issue
2.7 years ago by rpolicastro 13k
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2.0k
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Comment: Comment: WGCNA goodGenes message error
2.7 years ago by rpolicastro 13k
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2.2k
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Comment: Comment: General approach for unsupervised clustering of bulk RNAseq samples and deriving
2.7 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: Size of two scRNA-Seq conditions
2.7 years ago by rpolicastro 13k
2
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1.2k
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Comment: Comment: Size of two scRNA-Seq conditions
2.7 years ago by rpolicastro 13k
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2.4k
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Comment: Comment: WGCNA gene selection: gene significance or LASSO?
2.7 years ago by rpolicastro 13k
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946
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Comment: Comment: Single-cell RNA seq for bovine
2.8 years ago by rpolicastro 13k
1
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928
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Answer: Answer: How to swap fasta entrys in a fasta file?
2.8 years ago by rpolicastro 13k
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1.7k
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Comment: Comment: min.cells in CreateSeuratObject
2.8 years ago by rpolicastro 13k
2
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1.1k
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Answer: Answer: Create single cell reference for MuSIC
2.8 years ago by rpolicastro 13k
2
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1
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2.2k
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Answer: Answer: How to perform scRNA seq analysis?
2.8 years ago by rpolicastro 13k
2
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2.4k
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Comment: Comment: Make large matrix data interpretable. How?
2.8 years ago by rpolicastro 13k
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1.7k
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Comment: Comment: how to loop through various dataframes in R
2.8 years ago by rpolicastro 13k
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0
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798
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Comment: Comment: Differentiate samples in linear regression
2.8 years ago by rpolicastro 13k
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931
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Comment: Comment: Is it possible to create gene enrichment plot for wild type (only one type of sa
2.9 years ago by rpolicastro 13k
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2
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1.7k
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Comment: Comment: Filter only overlapping portion of read pairs?
2.9 years ago by rpolicastro 13k
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1
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3.5k
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Comment: Comment: find the mate of a read using pysam
2.9 years ago by rpolicastro 13k
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0
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889
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Job: Senior Research Associate/Scientist, Computational Biology
computational-biologist
updated 2.4 years ago by 45k • written 2.9 years ago by 13k
1,382 results • Page 5 of 28
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