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Comment:
Comment: NGS forensics: how to know if data is fabricated
9 hours ago by
Jeremy Leipzig
22k
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1
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411
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Comment:
Comment: gvcf joint calling
1 day ago by
Jeremy Leipzig
22k
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1
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411
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Comment:
Comment: gvcf joint calling
1 day ago by
Jeremy Leipzig
22k
1
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245
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Comment:
Comment: CombineGVCFs vs. MergeVcfs
12 days ago by
Jeremy Leipzig
22k
0
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1
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665
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Comment:
Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
19 days ago by
Jeremy Leipzig
22k
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297
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Comment:
Comment: Bioinformatics variant calling software
23 days ago by
Jeremy Leipzig
22k
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230
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Comment:
Comment: AUC=1, is it possible after lasso regression?
27 days ago by
Jeremy Leipzig
22k
0
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1
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453
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Comment:
Comment: I can't add VAF from population for all of my variants from VCF file
6 weeks ago by
Jeremy Leipzig
22k
1
vote
1
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487
views
Comment:
Comment: Snakemake rule that runs an assessment for once after completing other previous
7 weeks ago by
Jeremy Leipzig
22k
1
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1
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487
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Comment:
Comment: Snakemake rule that runs an assessment for once after completing other previous
7 weeks ago by
Jeremy Leipzig
22k
1
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0
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1.4k
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Comment:
Comment: Novel sparse optimisation for high accuracy cancer classification on the 33-canc
7 weeks ago by
Jeremy Leipzig
22k
0
votes
2
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487
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Comment:
Comment: Snakemake rule that runs an assessment for once after completing other previous
7 weeks ago by
Jeremy Leipzig
22k
1
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1
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452
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Comment:
Comment: Snakemake: how to define output from a dictionary according to wildcard
8 weeks ago by
Jeremy Leipzig
22k
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252
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Comment:
Comment: Resolution of ambiguous calls in germline vcf
8 weeks ago by
Jeremy Leipzig
22k
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795
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Comment:
Comment: What is the expected number of common/mutual/shared SNVs between two, three, fou
9 weeks ago by
Jeremy Leipzig
22k
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795
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Comment:
Comment: What is the expected number of common/mutual/shared SNVs between two, three, fou
9 weeks ago by
Jeremy Leipzig
22k
1
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31k
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Comment:
Comment: List of cloud genomics companies
9 weeks ago by
Jeremy Leipzig
22k
1
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0
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24k
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Comment:
Comment: Difference between tSNE and PCA analysis
9 weeks ago by
Jeremy Leipzig
22k
0
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1
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437
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Comment:
Comment: how to extract variants from the vcf.gz files linked below?
9 weeks ago by
Jeremy Leipzig
22k
0
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0
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31k
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Comment:
Comment: List of cloud genomics companies
10 weeks ago by
Jeremy Leipzig
22k
1
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0
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31k
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Comment:
Comment: List of cloud genomics companies
10 weeks ago by
Jeremy Leipzig
22k
1
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1
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356
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Comment:
Comment: Linear Mixed-Effects Model Coefficient Interpretation
10 weeks ago by
Jeremy Leipzig
22k
1
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1
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654
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Comment:
Comment: difference betwween hail and plink
11 weeks ago by
Jeremy Leipzig
22k
0
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0
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382
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Comment:
Comment: How to reference input variable in output section of rule of Snakemake rule
11 weeks ago by
Jeremy Leipzig
22k
0
votes
1
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457
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Comment:
Comment: 1000 Genome: Cause of duplicate variants with different genotypes
11 weeks ago by
Jeremy Leipzig
22k
0
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1
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457
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Comment:
Comment: 1000 Genome: Cause of duplicate variants with different genotypes
11 weeks ago by
Jeremy Leipzig
22k
0
votes
0
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557
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Comment:
Comment: What tools exist for filtering hundreds of VCFs (and annotated into VCFs in txt
3 months ago by
Jeremy Leipzig
22k
0
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0
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406
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Comment:
Comment: How quickly can an SRA submission proceed directly from S3
3 months ago by
Jeremy Leipzig
22k
0
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1
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406
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Comment:
Comment: How quickly can an SRA submission proceed directly from S3
3 months ago by
Jeremy Leipzig
22k
0
votes
0
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808
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Comment:
Comment: Isolating and extracting regions in VCF file
3 months ago by
Jeremy Leipzig
22k
0
votes
1
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703
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Comment:
Comment: GIAB Benchmarking
3 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
455
views
Comment:
Comment: Tool to Create Sequence Logo Plot with Indels or Alignment-Aware Position Freque
3 months ago by
Jeremy Leipzig
22k
2
votes
2
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1.2k
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Comment:
Comment: Problem with Mamba
4 months ago by
Jeremy Leipzig
22k
0
votes
0
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722
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Comment:
Comment: Multiallelic variants when merging VCF's with GLnexus
4 months ago by
Jeremy Leipzig
22k
0
votes
1
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722
views
Comment:
Comment: Multiallelic variants when merging VCF's with GLnexus
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
1.7k
views
Comment:
Comment: How to query 1000 genomes project VCF files for specific regions without downloa
4 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
722
views
Comment:
Comment: Multiallelic variants when merging VCF's with GLnexus
4 months ago by
Jeremy Leipzig
22k
3
votes
0
replies
874
views
Comment:
Comment: Individual vs. joint call VCFs
4 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
874
views
Comment:
Comment: Individual vs. joint call VCFs
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
2.6k
views
Comment:
Comment: How to display a VCF/BCF file or stream as a paginated table in a python web fra
4 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
312
views
Comment:
Comment: Bgen file not being opened by PRSice
5 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
923
views
Comment:
Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
5 months ago by
Jeremy Leipzig
22k
0
votes
0
replies
887
views
Comment:
Comment: Isaac aligner V4 genome aligner questions
5 months ago by
Jeremy Leipzig
22k
1
vote
0
replies
469
views
Comment:
Comment: How to find the Allele Number (AN) of a variant not reported on gnomAD
5 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
923
views
Comment:
Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
5 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
923
views
Comment:
Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
5 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
717
views
Comment:
Comment: Calculating ROC50 in R
5 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
717
views
Comment:
Comment: Calculating ROC50 in R
5 months ago by
Jeremy Leipzig
22k
1
vote
1
reply
935
views
Comment:
Comment: N50 value of bacterial assembly is not half of total assembly size
6 months ago by
Jeremy Leipzig
22k
0
votes
1
reply
669
views
Comment:
Comment: Confirming called variants
6 months ago by
Jeremy Leipzig
22k
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