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Answer: A: Identifying mate pair reads from SAM file without using QNAME
9.8 years ago by Devon Ryan 105k
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Comment: C: limma: blocking for batch/individual in paired samples with multiple tissues
9.8 years ago by Devon Ryan 105k
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Comment: Comment: Infer-experiment.py, is strand-specific?
updated 3.7 years ago by 45k • written 9.8 years ago by 105k
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Comment: Comment: What does it mean for a snp to be enriched?
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
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5.0k
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Comment: Comment: limma: blocking for batch/individual in paired samples with multiple tissues
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
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2.0k
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Comment: C: confused about cuffdiff sample design
9.8 years ago by Devon Ryan 105k
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Answer: A: which genome sequence fasta file should be used for builindg bowtie2 index ?
9.8 years ago by Devon Ryan 105k
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Comment: C: Is this convention canonical for upstream variants?
9.8 years ago by Devon Ryan 105k
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2.0k
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Answer: Answer: confused about cuffdiff sample design
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
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2.1k
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Answer: A: SNPs in samtools mpileup using multisample and individual samples
9.8 years ago by Devon Ryan 105k
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Comment: C: Python multiprocessing FASTQ file
9.8 years ago by Devon Ryan 105k
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Comment: C: best microRNA normalisation method
9.8 years ago by Devon Ryan 105k
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6.0k
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Comment: C: Python multiprocessing FASTQ file
9.8 years ago by Devon Ryan 105k
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Comment: C: Conceptual question regarding retrotransposon (RNA-seq) analysis
9.8 years ago by Devon Ryan 105k
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2.3k
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Comment: Comment: Conceptual question regarding retrotransposon (RNA-seq) analysis
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
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6.0k
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Comment: C: Python multiprocessing FASTQ file
9.8 years ago by Devon Ryan 105k
2
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6.0k
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Answer: A: Python multiprocessing FASTQ file
9.8 years ago by Devon Ryan 105k
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Answer: A: Bowtie2-Samtools. Too many degenerate bases
9.8 years ago by Devon Ryan 105k
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4.1k
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Comment: C: Normalization scheme to use for upstream sequences read count in (Chip-seq histo
9.8 years ago by Devon Ryan 105k
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2.5k
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Comment: C: my experimental design for cuffdiff
9.8 years ago by Devon Ryan 105k
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3.3k
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Comment: Comment: #saveNCBI - it's a joke, right?
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
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3.3k
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Comment: C: #saveNCBI - it's a joke, right?
9.8 years ago by Devon Ryan 105k
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Comment: C: my experimental design for cuffdiff
9.8 years ago by Devon Ryan 105k
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2.5k
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Comment: C: my experimental design for cuffdiff
9.8 years ago by Devon Ryan 105k
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Answer: A: Merging Two Biostars Profiles
9.8 years ago by Devon Ryan 105k
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Comment: C: How does OMIM select the clinically associated variants (SNPs)?
9.8 years ago by Devon Ryan 105k
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2.2k
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Answer: A: What are these chromosomes in the snp138 annotation?
9.8 years ago by Devon Ryan 105k
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1.9k
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Answer: A: any extra steps between using tophat and cufflinks
9.8 years ago by Devon Ryan 105k
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1.9k
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Comment: C: any extra steps between using tophat and cufflinks
9.8 years ago by Devon Ryan 105k
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Answer: A: co-expression between transcription factors and their targets
9.8 years ago by Devon Ryan 105k
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4.2k
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Comment: C: DESeq2 error in DESeqDataSetFromMatrix and SummarizedExperiment !
9.8 years ago by Devon Ryan 105k
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1
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47k
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Comment: C: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
9.8 years ago by Devon Ryan 105k
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Comment: C: p-value distribution of edger or deseq2
9.8 years ago by Devon Ryan 105k
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3.0k
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Answer: A: p-value distribution of edger or deseq2
9.8 years ago by Devon Ryan 105k
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4.5k
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Comment: C: Errors in sam file after bwa SAMPE alignment.
9.8 years ago by Devon Ryan 105k
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2.2k
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Comment: C: Do you keep this batch or discard it?
9.8 years ago by Devon Ryan 105k
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Comment: C: Bowtie2-Samtools. Too many degenerate bases
9.8 years ago by Devon Ryan 105k
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2.2k
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Comment: C: Do you keep this batch or discard it?
9.8 years ago by Devon Ryan 105k
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9.5k
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Comment: C: Genomic Coverage - Samtool's undocumented "depth" verses the poorly documented p
9.8 years ago by Devon Ryan 105k
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10k
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Comment: C: UCSC hg19 gtf (genePredToGtf OS incompatibility)
9.8 years ago by Devon Ryan 105k
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4.5k
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Comment: C: Errors in sam file after bwa SAMPE alignment.
9.8 years ago by Devon Ryan 105k
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4.5k
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Comment: C: ribosomal depletion for RNA seq
9.8 years ago by Devon Ryan 105k
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3
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10k
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Comment: C: UCSC hg19 gtf (genePredToGtf OS incompatibility)
9.8 years ago by Devon Ryan 105k
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1
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3.8k
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Answer: A: Paired-end RNA sequence - which read is complimentary?
9.8 years ago by Devon Ryan 105k
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6.3k
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Comment: Comment: How does a read, which is complementary to the reference genome, map to the refe
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
5
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6.3k
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Answer: Answer: How does a read, which is complementary to the reference genome, map to the refe
updated 3.4 years ago by 45k • written 9.8 years ago by 105k
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5.4k
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Comment: C: if my data sets are strand-spesific RNA-seq
9.8 years ago by Devon Ryan 105k
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5.4k
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Comment: C: if my data sets are strand-spesific RNA-seq
9.8 years ago by Devon Ryan 105k
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5.4k
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Answer: Answer: Are my RNA-seq datasets strand-specific?
updated 3.7 years ago by 45k • written 9.8 years ago by 105k
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1
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4.5k
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Comment: C: Errors in sam file after bwa SAMPE alignment.
9.8 years ago by Devon Ryan 105k
10,053 results • Page 101 of 202
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