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Comment: C: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 10.7 years ago by 105k
0
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22k
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Comment: C: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 10.7 years ago by 105k
1
vote
0
replies
22k
views
Comment: C: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 10.7 years ago by 105k
1
vote
0
replies
22k
views
Comment: C: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 9.8 years ago by 105k
1
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1
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22k
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Comment: C: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 9.8 years ago by 105k
1
vote
1
reply
22k
views
Comment: C: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 10.7 years ago by 105k
3
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4
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22k
views
Answer: A: extracting the soft clipped seq only from a sam file
updated 6.3 years ago by 45k • written 10.7 years ago by 105k
0
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1
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3.4k
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Comment: C: Rsubread featureCounts with built-in mm10 vs Ensemble GRCm38.96.gff3
6.3 years ago by Devon Ryan 105k
2
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0
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9.3k
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Answer: A: Do you need a deduplication tool for FASTQ data in fastp?
6.3 years ago by Devon Ryan 105k
0
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1
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3.4k
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Comment: C: Rsubread featureCounts with built-in mm10 vs Ensemble GRCm38.96.gff3
6.3 years ago by Devon Ryan 105k
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0
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3.9k
views
Comment: C: CNVkit installation problem
6.3 years ago by Devon Ryan 105k
8
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2
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13k
views
Answer: A: Why do PCA+tSNE/viSNE or PCA+UMAP, and not just tSNE/viSNE or UMAP on their own?
6.3 years ago by Devon Ryan 105k
0
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1
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2.9k
views
Comment: C: ValueError("End of file without quality information.") when using SeqIO
6.3 years ago by Devon Ryan 105k
2
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0
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5.9k
views
Comment: C: Batch effect, how to create a model matrix
6.3 years ago by Devon Ryan 105k
1
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1
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5.9k
views
Comment: C: Batch effect, how to create a model matrix
6.3 years ago by Devon Ryan 105k
0
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1
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5.9k
views
Comment: C: Batch effect, how to create a model matrix
6.3 years ago by Devon Ryan 105k
1
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1
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3.7k
views
Comment: C: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
6.3 years ago by Devon Ryan 105k
0
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0
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12k
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Comment: C: SRR/ERR/DRR prefixes in SRA - What's the difference?
6.3 years ago by Devon Ryan 105k
2
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1
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3.7k
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Answer: A: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
6.3 years ago by Devon Ryan 105k
0
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0
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1.6k
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Answer: A: Merging BAM file with Samtools
6.3 years ago by Devon Ryan 105k
0
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1
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3.4k
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Comment: C: longranger mkfastq : "unrecognised option '--qc' "
6.3 years ago by Devon Ryan 105k
0
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0
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3.4k
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Comment: C: longranger mkfastq : "unrecognised option '--qc' "
6.3 years ago by Devon Ryan 105k
0
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1
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3.4k
views
Comment: C: longranger mkfastq : "unrecognised option '--qc' "
6.3 years ago by Devon Ryan 105k
1
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1
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2.2k
views
Answer: A: HTSeq installation problem
6.3 years ago by Devon Ryan 105k
0
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0
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2.7k
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Comment: C: Running BLAST tool using python's multiprocessing package
6.3 years ago by Devon Ryan 105k
3
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1
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3.2k
views
Answer: A: BCL files as deliverables from a sequencing center
6.3 years ago by Devon Ryan 105k
0
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1
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3.2k
views
Comment: C: How to call a R variable in a loop with Slurm?
6.3 years ago by Devon Ryan 105k
0
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1
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3.2k
views
Comment: C: How to call a R variable in a loop with Slurm?
6.3 years ago by Devon Ryan 105k
0
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1
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1.7k
views
Comment: C: miRNA predictions from large set of long non coding RNA
6.3 years ago by Devon Ryan 105k
0
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1
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5.7k
views
Comment: C: scRNAseq: Split FASTQ into cell specific FASTQ Files
6.3 years ago by Devon Ryan 105k
0
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1
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2.0k
views
Comment: C: Moving average plot of gene expression ratio along the chromosome length
6.3 years ago by Devon Ryan 105k
1
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1
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5.7k
views
Comment: C: scRNAseq: Split FASTQ into cell specific FASTQ Files
6.4 years ago by Devon Ryan 105k
0
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0
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1.7k
views
Comment: C: Differential expression with leave one out?
6.4 years ago by Devon Ryan 105k
2
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1
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1.7k
views
Answer: A: Differential expression with leave one out?
6.4 years ago by Devon Ryan 105k
0
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1
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2.0k
views
Comment: C: Moving average plot of gene expression ratio along the chromosome length
6.4 years ago by Devon Ryan 105k
0
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0
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4.7k
views
Comment: C: Bismark rrbs data analysis
6.4 years ago by Devon Ryan 105k
1
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1
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1.8k
views
Comment: C: Bam to mapped fasta
6.4 years ago by Devon Ryan 105k
0
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1
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2.6k
views
Comment: C: Issue running deeptools on cluster via snakemake
6.4 years ago by Devon Ryan 105k
0
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0
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6.7k
views
Comment: C: Code golf: detecting homopolymers of length N in the (human) genome
6.4 years ago by Devon Ryan 105k
1
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1
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1.8k
views
Comment: C: Bam to mapped fasta
6.4 years ago by Devon Ryan 105k
0
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1
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1.8k
views
Comment: C: Bam to mapped fasta
6.4 years ago by Devon Ryan 105k
3
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0
replies
6.7k
views
Answer: A: Code golf: detecting homopolymers of length N in the (human) genome
6.4 years ago by Devon Ryan 105k
0
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0
replies
2.1k
views
Comment: C: Hisat2 splicesite file vs Tophat
6.4 years ago by Devon Ryan 105k
1
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1
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1.8k
views
Answer: A: Bam to mapped fasta
6.4 years ago by Devon Ryan 105k
1
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0
replies
1.0k
views
Answer: A: Whither my badges?
6.4 years ago by Devon Ryan 105k
0
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0
replies
1.4k
views
Comment: C: How to find internal stem-loop structure in a fasta file?
6.4 years ago by Devon Ryan 105k
0
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1
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1.4k
views
Comment: C: How to find internal stem-loop structure in a fasta file?
6.4 years ago by Devon Ryan 105k
3
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2
replies
6.6k
views
Answer: C: Salmon installation error
6.4 years ago by Devon Ryan 105k
0
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0
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1.8k
views
Comment: C: Free for academic use only licenses (If you want to sell your software please ju
6.4 years ago by Devon Ryan 105k
0
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1
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3.4k
views
Comment: C: Kallisto/Sleuth DTE analysis - LRT test results in more DTE compared to Wald tes
6.4 years ago by Devon Ryan 105k
10,053 results • Page 15 of 202
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