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Comment: Comment: Log2 Scale Deeptools
3.8 years ago by Devon Ryan 105k
3
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1
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2.5k
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Answer: Answer: Errors when ajusting pvalue on R
3.8 years ago by Devon Ryan 105k
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2.8k
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Answer: Answer: Normalizing BAM Files
3.8 years ago by Devon Ryan 105k
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3.2k
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Answer: Answer: deeptools reference-point center
3.9 years ago by Devon Ryan 105k
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1
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2.9k
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Comment: Comment: ? in cram files
3.9 years ago by Devon Ryan 105k
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1
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2.9k
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Answer: Answer: ? in cram files
3.9 years ago by Devon Ryan 105k
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0
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2.9k
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Comment: Comment: Singularity container for deepTools?
4.0 years ago by Devon Ryan 105k
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0
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2.8k
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Comment: Comment: Kmergenie module readfq not found
4.0 years ago by Devon Ryan 105k
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2.4k
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Comment: Comment: DESeq2 Not full Rank - Age & Medication
4.0 years ago by Devon Ryan 105k
2
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1
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2.4k
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Comment: Comment: DESeq2 Not full Rank - Age & Medication
4.0 years ago by Devon Ryan 105k
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2.0k
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Comment: Comment: Bedfile format deeptools
4.0 years ago by Devon Ryan 105k
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2
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2.0k
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Answer: Answer: Bedfile format deeptools
4.0 years ago by Devon Ryan 105k
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1
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1.3k
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Comment: Comment: Methylome Data or DE Analysis
4.1 years ago by Devon Ryan 105k
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2.6k
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Comment: Comment: Inserting Gaps into FASTA files for Alignment to Reference
4.1 years ago by Devon Ryan 105k
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0
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5.2k
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Comment: Comment: GC content in bilsulfite converted library
4.1 years ago by Devon Ryan 105k
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1
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14k
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Comment: Comment: ViennaRNA error: ImportError: No module named _RNA
4.2 years ago by Devon Ryan 105k
3
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0
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2.0k
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Comment: Comment: Using RefSeq gene annotation file to determine gene lengths
4.2 years ago by Devon Ryan 105k
4
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1
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1.6k
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Comment: Comment: Bioinformatics Definitions
4.2 years ago by Devon Ryan 105k
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7.1k
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Comment: Comment: Installing samtools version 1.12
4.3 years ago by Devon Ryan 105k
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1
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1.2k
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Answer: Answer: Look at Different Locus in the Bam File
4.3 years ago by Devon Ryan 105k
1
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1
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2.9k
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Answer: Answer: Remove prefix chrom:position before rsIDs
4.3 years ago by Devon Ryan 105k
4
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1
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7.1k
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Answer: Answer: Installing samtools version 1.12
4.3 years ago by Devon Ryan 105k
2
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1
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2.5k
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Comment: Comment: How much weights a million reads
4.3 years ago by Devon Ryan 105k
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4.8k
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Comment: Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
4.3 years ago by Devon Ryan 105k
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1
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2.2k
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Comment: Comment: Multi-factor Analysis in DeSEQ2
4.3 years ago by Devon Ryan 105k
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923
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Answer: Answer: Are [*.removed.sorted.bai] and [*.metrix.txt] needed for the next step?
4.3 years ago by Devon Ryan 105k
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4.0k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
4.3 years ago by Devon Ryan 105k
4
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1
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4.0k
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Answer: Answer: deeptools 3.5 Segmentation fault:11
4.3 years ago by Devon Ryan 105k
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1
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4.0k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
4.3 years ago by Devon Ryan 105k
0
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1
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4.0k
views
Comment: Comment: deeptools 3.5 Segmentation fault:11
4.3 years ago by Devon Ryan 105k
0
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0
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1.1k
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Comment: Comment: Performance metrics of aligners and variant callers
4.4 years ago by Devon Ryan 105k
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1
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5.2k
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Comment: Comment: Multiqc
4.4 years ago by Devon Ryan 105k
1
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0
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4.1k
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Comment: Comment: Deeptools, ComputeMatrix and plotProfile
4.4 years ago by Devon Ryan 105k
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2
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4.1k
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Answer: Answer: Deeptools, ComputeMatrix and plotProfile
4.4 years ago by Devon Ryan 105k
1
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0
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1.4k
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Answer: Answer: calculate area under curve for profile plot (deepTools)
4.4 years ago by Devon Ryan 105k
0
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0
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1.2k
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Comment: Comment: Does GISAID fasta files contain spike protein or whole genome sequence?
4.4 years ago by Devon Ryan 105k
0
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1
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4.5k
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Comment: Comment: DESeq2 multi-factor design
4.4 years ago by Devon Ryan 105k
1
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1
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3.2k
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Comment: Comment: ATAC-Seq: Filter bams for differential analysis or not
4.4 years ago by Devon Ryan 105k
0
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1
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1.3k
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Comment: Comment: Suggestion for modelling transcriptomics analysis
4.4 years ago by Devon Ryan 105k
0
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0
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5.0k
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Comment: Comment: Converting beta value to M value (when beta=1)
4.5 years ago by Devon Ryan 105k
45
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23
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7.4k
views
6 follow
Forum: biostar.slack.com: Chat for the biostars community -- [ feel free to join ]
chat slack
updated 2.6 years ago by 45k • written 7.5 years ago by 105k
1
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0
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1.5k
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Answer: Answer: Can I control the exposure time as a batch effect?
4.5 years ago by Devon Ryan 105k
1
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0
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1.9k
views
Answer: A: If I want to learn bioinformatics as a computer scientist, would it help to lear
4.5 years ago by Devon Ryan 105k
0
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1
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1.4k
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Comment: C: Lmfit function, to analyse differential expressions, not coming from arrays
4.5 years ago by Devon Ryan 105k
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1
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2.3k
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Comment: C: A layman trying to understand what a FASTA file is
4.5 years ago by Devon Ryan 105k
0
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0
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10k
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Comment: C: Remove supplementary alignments from a bam file
4.5 years ago by Devon Ryan 105k
6
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0
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9.7k
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Answer: A: Update to tbb (2021.1.1, conda-forge) breaks bowtie2 (bioconda)
4.5 years ago by Devon Ryan 105k
0
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0
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9.7k
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Comment: C: Update to tbb (2021.1.1, conda-forge) breaks bowtie2 (bioconda)
4.5 years ago by Devon Ryan 105k
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1
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9.7k
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Comment: C: Update to tbb (2021.1.1, conda-forge) breaks bowtie2 (bioconda)
4.5 years ago by Devon Ryan 105k
3
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0
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7.1k
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Comment: C: bamCoverage bin size for narrow and broad histone marks
4.5 years ago by Devon Ryan 105k
10,053 results • Page 2 of 202
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