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Comment: C: Quickly retrieve reference genome sequence within python
7.0 years ago by Devon Ryan 105k
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Comment: C: cutadapt error problem
7.0 years ago by Devon Ryan 105k
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3.0k
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Comment: C: plotting according p-value
7.0 years ago by Devon Ryan 105k
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Comment: C: Finding protein- encoding genes in a sequence
7.0 years ago by Devon Ryan 105k
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Answer: A: Testing bigWig file integrity
7.0 years ago by Devon Ryan 105k
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2.6k
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Answer: A: All CpG sites in human genome RRBS
7.0 years ago by Devon Ryan 105k
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5.1k
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Comment: C: Error while running gatk
7.0 years ago by Devon Ryan 105k
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Answer: A: Abundance/frequency of RNASeq raw reads mapped to a transcript exon
7.0 years ago by Devon Ryan 105k
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5.1k
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Answer: A: Error while running gatk
7.0 years ago by Devon Ryan 105k
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Comment: C: Tool to predict perturbation in biological system
7.0 years ago by Devon Ryan 105k
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Comment: C: Sort bam file by coordinates using samtools
7.0 years ago by Devon Ryan 105k
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2.8k
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Comment: C: Filter reads by calculating the distribution of phred score in each individual r
7.0 years ago by Devon Ryan 105k
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18k
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Comment: C: Sort bam file by coordinates using samtools
7.0 years ago by Devon Ryan 105k
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2.8k
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Answer: A: Filter reads by calculating the distribution of phred score in each individual r
7.0 years ago by Devon Ryan 105k
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2.9k
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Comment: C: Why people are not working on gene prioritization and candidate gene selection f
7.0 years ago by Devon Ryan 105k
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1.9k
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Comment: C: Toxins ion channel inhibitors
7.0 years ago by Devon Ryan 105k
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2.0k
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Comment: C: Abundance/frequency of RNASeq raw reads mapped to a transcript exon
7.0 years ago by Devon Ryan 105k
2
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1.4k
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Answer: A: How to use hicFindEnrichedContacts?
7.0 years ago by Devon Ryan 105k
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1.4k
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Answer: A: Peak calling for microRNA
7.0 years ago by Devon Ryan 105k
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1.4k
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Comment: C: Peak calling for microRNA
7.0 years ago by Devon Ryan 105k
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7.7k
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Comment: C: Removal of repeat and blacklist regions from ChIP-seq data
7.0 years ago by Devon Ryan 105k
2
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5.9k
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Answer: A: bowtie2 alignments "Error: No input read files were valid"
7.0 years ago by Devon Ryan 105k
3
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2.4k
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Answer: A: Batch effect in RNAseq
7.0 years ago by Devon Ryan 105k
2
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2.9k
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Comment: C: Why people are not working on gene prioritization and candidate gene selection f
7.0 years ago by Devon Ryan 105k
1
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1
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2.9k
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Comment: C: Why people are not working on gene prioritization and candidate gene selection f
7.0 years ago by Devon Ryan 105k
2
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8.7k
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Answer: A: [limma] LogFC interpretation
7.0 years ago by Devon Ryan 105k
3
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1
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2.9k
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Answer: A: Why people are not working on gene prioritization and candidate gene selection f
7.0 years ago by Devon Ryan 105k
1
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1
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1.4k
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Answer: A: Could the batch effect be a set of numeric values in DEseq2?
7.0 years ago by Devon Ryan 105k
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4.0k
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Comment: C: Bioinformatics terms that might be confusing for beginners
7.0 years ago by Devon Ryan 105k
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1
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6.4k
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Comment: C: ENSEMBL annotation file for quantification: which file to use?
7.0 years ago by Devon Ryan 105k
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6.4k
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Answer: A: ENSEMBL annotation file for quantification: which file to use?
7.0 years ago by Devon Ryan 105k
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3.5k
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Answer: A: Single-end vs Pair-end RRBS methyation sequencing
updated 7.0 years ago by 45k • written 9.6 years ago by 105k
1
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2.6k
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Comment: C: Analyzing fold change when Cq value in treatment condition is 0 (not expressed)
7.0 years ago by Devon Ryan 105k
2
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4.2k
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Comment: C: Problems running VC GATK: SAM/BAM/CRAM file dedup.bam is malformed
7.0 years ago by Devon Ryan 105k
1
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1
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4.2k
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Comment: C: Problems running VC GATK: SAM/BAM/CRAM file dedup.bam is malformed
7.0 years ago by Devon Ryan 105k
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1
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3.8k
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Answer: C: rsem-calculate-expression error message
7.0 years ago by Devon Ryan 105k
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1.5k
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Answer: A: what next after DEGs?
7.0 years ago by Devon Ryan 105k
2
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1
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2.6k
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Answer: A: Analyzing fold change when Cq value in treatment condition is 0 (not expressed)
7.0 years ago by Devon Ryan 105k
1
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1
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1.8k
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Answer: A: Count 0, 5, 20 covered sites in bam
7.0 years ago by Devon Ryan 105k
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1.2k
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Answer: A: Problem with RNA seq library preparation
7.0 years ago by Devon Ryan 105k
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3.7k
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Comment: C: Problem with low count removal in edgeR ?
7.0 years ago by Devon Ryan 105k
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1
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3.7k
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Comment: C: Problem with low count removal in edgeR ?
7.0 years ago by Devon Ryan 105k
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1
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3.7k
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Comment: C: Problem with low count removal in edgeR ?
7.0 years ago by Devon Ryan 105k
1
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1.9k
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Comment: C: Metagenomics - mothur
7.0 years ago by Devon Ryan 105k
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1
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3.7k
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Comment: C: Problem with low count removal in edgeR ?
7.0 years ago by Devon Ryan 105k
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1
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3.7k
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Comment: C: Problem with low count removal in edgeR ?
7.0 years ago by Devon Ryan 105k
2
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2
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4.3k
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Answer: C: Programming language for Computational Biology
updated 7.0 years ago by 45k • written 9.6 years ago by 105k
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Answer: A: Cross platform gene expression comparison and threshold choice
7.0 years ago by Devon Ryan 105k
2
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Answer: A: Lmer() for RNA-seq with batch as random effect: how to prepare input?
updated 7.0 years ago by 45k • written 9.6 years ago by 105k
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39k
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Comment: C: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 7.0 years ago by 45k • written 10.8 years ago by 105k
10,053 results • Page 24 of 202
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