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1
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Comment: C: The meaning of differentially expressed (DE) gene level
4.6 years ago by Devon Ryan 105k
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Comment: C: Calculating fold change...CONFUSION
4.6 years ago by Devon Ryan 105k
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1.5k
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Answer: A: Calculating fold change...CONFUSION
4.6 years ago by Devon Ryan 105k
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Comment: C: How To Write Data In A Granges Object To A Bed File.
updated 4.6 years ago by 45k • written 11.7 years ago by 105k
34
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5
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Answer: A: How To Write Data In A Granges Object To A Bed File.
updated 4.6 years ago by 45k • written 11.8 years ago by 105k
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4.2k
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Comment: C: What are those black lines in my heatmap?
4.6 years ago by Devon Ryan 105k
3
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4.2k
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Answer: A: What are those black lines in my heatmap?
4.6 years ago by Devon Ryan 105k
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Comment: C: BigWig from ensembl assembly to UCSC session
4.7 years ago by Devon Ryan 105k
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5.7k
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Comment: C: BigWig from ensembl assembly to UCSC session
4.7 years ago by Devon Ryan 105k
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12k
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Comment: C: how is obtained the BED score values (the 5th column of the bed files) in BED fi
4.7 years ago by Devon Ryan 105k
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Answer: A: error with vcfutils when building consensus sequence with samtools and bcftools
updated 4.7 years ago by 45k • written 10.6 years ago by 105k
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1
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2.3k
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Comment: C: hisat2 alignment error
4.7 years ago by Devon Ryan 105k
2
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10.0k
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Answer: A: ATAC-seq +4 -5 shift
4.7 years ago by Devon Ryan 105k
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1
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3.8k
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Comment: C: Extracting Methylation Data
4.8 years ago by Devon Ryan 105k
1
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2.0k
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Answer: C: Counting data with ht seq
4.8 years ago by Devon Ryan 105k
3
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1
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2.7k
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Answer: A: Is it normal to obtain a perfectly dark blue "Per tile sequence quality" plot in
4.8 years ago by Devon Ryan 105k
1
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2.9k
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Answer: Answer: Are topics such as Metagenomics and Genome Editing a good start for someone new
updated 3.5 years ago by 45k • written 10.7 years ago by 105k
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1.5k
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Comment: C: Is there a stagewise testing procedure for DESeq2?
4.8 years ago by Devon Ryan 105k
3
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1
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1.5k
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Answer: Answer: Is there a stagewise testing procedure for DESeq2?
4.8 years ago by Devon Ryan 105k
2
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2
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3.7k
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Comment: C: How to count the number of codons in a frame or order using the equation?
4.8 years ago by Devon Ryan 105k
1
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3.4k
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Comment: C: RNAseq bad PCA, a differential expression analysis killer ?
4.8 years ago by Devon Ryan 105k
2
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2.0k
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Answer: A: Converting to decimal values
4.8 years ago by Devon Ryan 105k
0
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1
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3.4k
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Comment: C: RNAseq bad PCA, a differential expression analysis killer ?
4.8 years ago by Devon Ryan 105k
1
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1
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3.7k
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Answer: A: How to count the number of codons in a frame or order using the equation?
4.8 years ago by Devon Ryan 105k
2
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1
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10k
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Comment: C: Deseq2 with one factor and multiple levels
4.8 years ago by Devon Ryan 105k
2
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1
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10k
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Comment: C: Deseq2 with one factor and multiple levels
4.8 years ago by Devon Ryan 105k
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3.8k
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Answer: A: DeepTools plotProfile y axis units?
4.9 years ago by Devon Ryan 105k
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1
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2.1k
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Answer: A: MultiBamSummary for correlating ChIPseq datasets
4.9 years ago by Devon Ryan 105k
10
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1
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7.1k
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Answer: A: Scaling vs normalization in bamCompare
4.9 years ago by Devon Ryan 105k
5
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2
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41k
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Answer: A: how to convert a long fasta-file into many separate single fasta sequences
updated 4.9 years ago by 45k • written 11.2 years ago by 105k
4
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1
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8.8k
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Answer: C: update salmon with conda
4.9 years ago by Devon Ryan 105k
1
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5.2k
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Comment: C: Doubt on removing duplicates on amplicon sequencing data
4.9 years ago by Devon Ryan 105k
0
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6.5k
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Comment: C: deepTools computeMatrix need at least one array to concatenate error
4.9 years ago by Devon Ryan 105k
0
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0
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5.6k
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Comment: C: Samtool (Faidx) - Signal 11 Termination Error
updated 4.9 years ago by 45k • written 12.2 years ago by 105k
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1.4k
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Comment: C: Plot a dotted line to the start of the regions in computeMatrix, deepTools
5.0 years ago by Devon Ryan 105k
0
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3.3k
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Comment: C: Comparing input read subtracted ChIP-read profiles using Deeptools v3.4.3
5.0 years ago by Devon Ryan 105k
3
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1
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3.3k
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Answer: A: Comparing input read subtracted ChIP-read profiles using Deeptools2
5.0 years ago by Devon Ryan 105k
1
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1
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1.4k
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Answer: A: Flip the heatmaps of ChIP-seq data to match TSS of +/- strand in deeptools
5.0 years ago by Devon Ryan 105k
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1
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1.4k
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Answer: A: Plot a dotted line to the start of the regions in computeMatrix, deepTools
5.0 years ago by Devon Ryan 105k
0
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1
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10k
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Comment: C: GTF/GFF file for feature count
5.0 years ago by Devon Ryan 105k
2
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3.2k
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Answer: A: Why STAR Aligner limits alignments to soft-masked regions (lowercase letters in
5.0 years ago by Devon Ryan 105k
0
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0
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2.4k
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Comment: C: Deeptools correlation plot: between RNAseq and H3K27ac ChIPseq
5.0 years ago by Devon Ryan 105k
1
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1
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2.4k
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Comment: C: Deeptools correlation plot: between RNAseq and H3K27ac ChIPseq
5.0 years ago by Devon Ryan 105k
0
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1
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1.7k
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Answer: A: what the mean of Genomic content
5.0 years ago by Devon Ryan 105k
2
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1.7k
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Comment: C: what the mean of Genomic content
5.0 years ago by Devon Ryan 105k
0
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2.9k
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Comment: C: What statistical test for CpG DMR ?
5.0 years ago by Devon Ryan 105k
1
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4.3k
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Comment: C: DiffBind - normalization methods with biologically-relevant differences in signa
5.0 years ago by Devon Ryan 105k
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0
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1.9k
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Comment: C: help with segmentation fault deeptools
5.0 years ago by Devon Ryan 105k
1
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1
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2.1k
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Answer: C: What is "Possible polymerase run-on fragment"?
updated 5.0 years ago by 45k • written 7.3 years ago by 105k
0
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1
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1.9k
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Comment: C: help with segmentation fault deeptools
5.0 years ago by Devon Ryan 105k
10,053 results • Page 3 of 202
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