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Answer: A: DESeq work flow in Galaxy
8.8 years ago by Devon Ryan 105k
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3.4k
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Comment: C: Issue: Scaled Region heat map using Deeptools 2.0 showing no signal, same files
8.8 years ago by Devon Ryan 105k
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1
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3.9k
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Comment: C: Ensembl GTF for Mouse that includes intron, exons, utrs, etc.
8.8 years ago by Devon Ryan 105k
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3.4k
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Comment: C: Issue: Scaled Region heat map using Deeptools 2.0 showing no signal, same files
8.8 years ago by Devon Ryan 105k
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2
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4.4k
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Comment: C: Differences between Counts and FPKMS
8.8 years ago by Devon Ryan 105k
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2.6k
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Answer: A: Error with correctGCBias in deepTools
8.8 years ago by Devon Ryan 105k
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2.6k
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Comment: C: Error with correctGCBias in deepTools
8.8 years ago by Devon Ryan 105k
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2.6k
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Comment: C: Error with correctGCBias in deepTools
8.8 years ago by Devon Ryan 105k
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2.6k
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Comment: C: Error with correctGCBias in deepTools
8.8 years ago by Devon Ryan 105k
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2.6k
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Comment: C: Error with correctGCBias in deepTools
8.8 years ago by Devon Ryan 105k
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2.6k
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Comment: C: Error with correctGCBias in deepTools
8.8 years ago by Devon Ryan 105k
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1
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2.2k
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Comment: C: Profile of methylation about the centromeres/telomeres of human
8.8 years ago by Devon Ryan 105k
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2.2k
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Answer: A: Profile of methylation about the centromeres/telomeres of human
8.8 years ago by Devon Ryan 105k
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14k
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Answer: A: extract small heatmap from big one deeptools
8.8 years ago by Devon Ryan 105k
2
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2.4k
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Answer: Answer: VT tools can`t input reference when attempting to normalize a VCF file
8.8 years ago by Devon Ryan 105k
4
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3
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2.5k
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Job: Two Bioinformaticians @ MPI-IE Freiburg, Germany
ChIP-Seq NGS RNA-Seq
updated 2.6 years ago by 45k • written 8.8 years ago by 105k
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2.3k
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Comment: C: RNA-Seq tophat command error?
8.8 years ago by Devon Ryan 105k
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2.3k
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Comment: C: RNA-Seq tophat command error?
8.8 years ago by Devon Ryan 105k
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2.2k
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Comment: C: prepare the data for package (HardyWeinberg) to test the HWExactMat
8.8 years ago by Devon Ryan 105k
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2.2k
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Comment: C: prepare the data for package (HardyWeinberg) to test the HWExactMat
8.8 years ago by Devon Ryan 105k
4
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3.5k
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Comment: C: Fold Change accepts, FDR denies; which one to use ?
8.8 years ago by Devon Ryan 105k
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3.5k
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Answer: A: Fold Change accepts, FDR denies; which one to use ?
8.8 years ago by Devon Ryan 105k
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7.0k
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Comment: C: TrimGalore parameter form Nextera paired-end reads adapter removal
8.8 years ago by Devon Ryan 105k
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2
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2.2k
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Comment: C: prepare the data for package (HardyWeinberg) to test the HWExactMat
8.8 years ago by Devon Ryan 105k
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1
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2.2k
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Comment: C: prepare the data for package (HardyWeinberg) to test the HWExactMat
8.8 years ago by Devon Ryan 105k
2
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1
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2.2k
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Answer: A: prepare the data for package (HardyWeinberg) to test the HWExactMat
8.8 years ago by Devon Ryan 105k
2
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1
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4.4k
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Answer: A: deeptools computeMatrix error
8.8 years ago by Devon Ryan 105k
2
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1
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7.0k
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Answer: A: TrimGalore parameter form Nextera paired-end reads adapter removal
8.8 years ago by Devon Ryan 105k
1
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1
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11k
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Comment: C: duplicate 'row.names' are not allowed
8.8 years ago by Devon Ryan 105k
3
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1
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11k
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Answer: A: duplicate 'row.names' are not allowed
8.8 years ago by Devon Ryan 105k
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0
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2.1k
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Comment: C: Sinle end reads to Look like paired end on Galaxy
8.8 years ago by Devon Ryan 105k
2
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1.4k
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Answer: A: Genome orientation, convention to begin at one end of a chromosome
8.8 years ago by Devon Ryan 105k
2
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2.3k
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Answer: A: Switching from Linuxbrew to Bioconda
8.8 years ago by Devon Ryan 105k
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1
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2.1k
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Comment: C: Sinle end reads to Look like paired end on Galaxy
8.8 years ago by Devon Ryan 105k
1
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1
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2.0k
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Answer: A: Select TSS to know if genes are differentially transcribed
8.8 years ago by Devon Ryan 105k
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1
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15k
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Comment: C: Pysam Fetching specified regions
8.8 years ago by Devon Ryan 105k
2
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1
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15k
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Comment: C: Pysam Fetching specified regions
8.8 years ago by Devon Ryan 105k
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15k
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Comment: C: Pysam Fetching specified regions
8.8 years ago by Devon Ryan 105k
0
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15k
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Answer: A: Pysam Fetching specified regions
8.8 years ago by Devon Ryan 105k
1
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1
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2.0k
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Answer: A: Coverage-search algorithm is turned on, making this step very slow
8.8 years ago by Devon Ryan 105k
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0
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4.2k
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Comment: C: Segmentation fault (core dumped) with Samtools index sorted.bam
8.8 years ago by Devon Ryan 105k
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1
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4.0k
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Answer: A: Assign BigWig scores to Bed file (gene list): ChIP-seq
8.8 years ago by Devon Ryan 105k
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1
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4.2k
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Answer: A: Segmentation fault (core dumped) with Samtools index sorted.bam
8.8 years ago by Devon Ryan 105k
4
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0
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2.8k
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Answer: A: Hand-waving Multidisciplinary Aspects of Research Projects (Discussion)
8.8 years ago by Devon Ryan 105k
1
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0
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2.1k
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Comment: C: Plot a Score for Several Genomic Regions
8.8 years ago by Devon Ryan 105k
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6.0k
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Comment: C: deepTools cluster information?
8.8 years ago by Devon Ryan 105k
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1
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1.7k
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Answer: A: Chipseq with three replicates
8.8 years ago by Devon Ryan 105k
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4.6k
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Comment: C: bigWig to bigBed conversion
8.8 years ago by Devon Ryan 105k
8
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2
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6.0k
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Answer: A: deepTools cluster information?
8.8 years ago by Devon Ryan 105k
1
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1
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4.6k
views
Comment: C: bigWig to bigBed conversion
8.8 years ago by Devon Ryan 105k
10,053 results • Page 66 of 202
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