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0
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1.9k
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Comment: C: bam-readcube -d option is not working
8.8 years ago by Devon Ryan 105k
3
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1
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2.2k
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Answer: A: Maximum variation in biological replicates
8.8 years ago by Devon Ryan 105k
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3.4k
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Answer: A: bowtie2 filter for maximum alignment score
8.8 years ago by Devon Ryan 105k
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0
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7.3k
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Comment: C: Bowtie 2: bowtie build does not create .rev index files
8.8 years ago by Devon Ryan 105k
1
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1
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7.2k
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Comment: C: Correct GC bias using read counts and Loess regression method
8.8 years ago by Devon Ryan 105k
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2.0k
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Answer: A: Dependencies auto-installed with Conda?
8.8 years ago by Devon Ryan 105k
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1
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3.8k
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Answer: A: New to all of this: Getting phred score from fast Q
8.8 years ago by Devon Ryan 105k
2
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2
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7.3k
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Comment: C: Bowtie 2: bowtie build does not create .rev index files
8.8 years ago by Devon Ryan 105k
1
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2
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7.3k
views
Comment: C: Bowtie 2: bowtie build does not create .rev index files
8.8 years ago by Devon Ryan 105k
0
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0
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7.3k
views
Comment: C: Bowtie 2: bowtie build does not create .rev index files
8.8 years ago by Devon Ryan 105k
0
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0
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2.1k
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Comment: C: Low coverage across reference in certain locations
8.8 years ago by Devon Ryan 105k
1
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0
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39k
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Comment: C: Remove inf and NA from data frame
8.8 years ago by Devon Ryan 105k
3
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2
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39k
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Answer: A: Remove inf and NA from data frame
8.8 years ago by Devon Ryan 105k
1
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2
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39k
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Comment: C: Remove inf and NA from data frame
8.8 years ago by Devon Ryan 105k
0
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1
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2.1k
views
Comment: C: Low coverage across reference in certain locations
8.8 years ago by Devon Ryan 105k
2
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2
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39k
views
Comment: C: Remove inf and NA from data frame
8.8 years ago by Devon Ryan 105k
0
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1
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7.6k
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Comment: C: SAM validation error
8.8 years ago by Devon Ryan 105k
0
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0
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2.4k
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Comment: C: Bedtools Intersect -v returns same file, with only one line removed
8.8 years ago by Devon Ryan 105k
0
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1
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5.9k
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Comment: C: Why number of #read1 and #read2 is different in samtools flagstat output?
8.9 years ago by Devon Ryan 105k
5
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1
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5.9k
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Answer: A: Why number of #read1 and #read2 is different in samtools flagstat output?
8.9 years ago by Devon Ryan 105k
0
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1
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3.9k
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Comment: C: BWA mem paired end vs single end shows unusual flagstat summary
8.9 years ago by Devon Ryan 105k
1
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2
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2.8k
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Comment: C: BLAT against nt
8.9 years ago by Devon Ryan 105k
1
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0
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3.9k
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Comment: C: Help for limma DE interpretation.
8.9 years ago by Devon Ryan 105k
0
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1
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3.9k
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Comment: C: BWA mem paired end vs single end shows unusual flagstat summary
8.9 years ago by Devon Ryan 105k
1
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0
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2.5k
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Comment: C: non-metric multidimensional scaling for RNAseq or enrichment experiments
8.9 years ago by Devon Ryan 105k
0
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1
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2.0k
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Answer: A: What is mean that mpileup read depth (read count) 0?
8.9 years ago by Devon Ryan 105k
1
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1
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12k
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Comment: C: how is obtained the BED score values (the 5th column of the bed files) in BED fi
8.9 years ago by Devon Ryan 105k
0
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0
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2.3k
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Comment: C: IGV idxsession files with bigwig URLs
8.9 years ago by Devon Ryan 105k
0
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1
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3.9k
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Answer: A: Help for limma DE interpretation.
8.9 years ago by Devon Ryan 105k
1
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1
reply
12k
views
Answer: A: how is obtained the BED score values (the 6th column of the bed files) in BED fi
8.9 years ago by Devon Ryan 105k
0
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1
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3.7k
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Comment: C: calculate mappability score for each window
8.9 years ago by Devon Ryan 105k
0
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0
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2.0k
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Comment: C: compare rows of colData and count Matrix
8.9 years ago by Devon Ryan 105k
3
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1
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8.3k
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Comment: C: Develop an R package for CRAN vs BioConductor
8.9 years ago by Devon Ryan 105k
1
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0
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1.7k
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Comment: C: microRNA high-throughout sequencing analysis
8.9 years ago by Devon Ryan 105k
1
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0
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4.1k
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Comment: C: Add GenomicRanges to SummarizedExperiment
8.9 years ago by Devon Ryan 105k
0
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0
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3.5k
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Comment: C: PCA Scatterplot matrices in R
8.9 years ago by Devon Ryan 105k
0
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1
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4.1k
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Comment: C: Add GenomicRanges to SummarizedExperiment
8.9 years ago by Devon Ryan 105k
1
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1
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6.6k
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Answer: A: How to read in count data from matrix of read counts into Deseq2
8.9 years ago by Devon Ryan 105k
0
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1
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4.1k
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Comment: C: Add GenomicRanges to SummarizedExperiment
8.9 years ago by Devon Ryan 105k
1
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1
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2.1k
views
Comment: C: Question: error in Limma analysis - estimated df (df.0) for prior value of varia
8.9 years ago by Devon Ryan 105k
2
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1
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3.5k
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Comment: C: PCA Scatterplot matrices in R
8.9 years ago by Devon Ryan 105k
1
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0
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7.5k
views
Comment: C: Tophat and Bowtie installed with Conda not working on test data.
8.9 years ago by Devon Ryan 105k
0
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0
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1.6k
views
Comment: C: problem in extracting sequences
8.9 years ago by Devon Ryan 105k
0
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1
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7.5k
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Comment: C: Tophat and Bowtie installed with Conda not working on test data.
8.9 years ago by Devon Ryan 105k
1
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1
reply
7.5k
views
Comment: C: Tophat and Bowtie installed with Conda not working on test data.
8.9 years ago by Devon Ryan 105k
3
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2
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2.7k
views
Answer: A: standard deviaition using R
updated 8.9 years ago by 12k • written 8.9 years ago by 105k
0
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0
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7.5k
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Comment: C: Tophat and Bowtie installed with Conda not working on test data.
8.9 years ago by Devon Ryan 105k
1
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0
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3.5k
views
Comment: C: How many tests does it take to warrant a microarray/RNA-seq approach to differen
8.9 years ago by Devon Ryan 105k
2
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0
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2.7k
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Comment: C: standard deviaition using R
8.9 years ago by Devon Ryan 105k
1
vote
1
reply
1.6k
views
Answer: A: problem in extracting sequences
8.9 years ago by Devon Ryan 105k
10,053 results • Page 68 of 202
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