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Comment: Comment: How to download the complete database Nucleotide collection (nr/nt)?
14 months ago by ando.kelli ▴ 60
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1
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2.4k
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Comment: Comment: FASTA file split
14 months ago by ando.kelli ▴ 60
2
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1
reply
961
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Using Trinity scripts with Singularity
transcriptomics Trinity Singularity
updated 15 months ago by 141k • written 15 months ago by ▴ 60
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3
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4.4k
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Calculate percentage mapped reads from Bowtie2/RSEM
RSEM Bowtie2 Mapped Reads resm-plot-model flagstat
updated 4.2 years ago by ▴ 840 • written 7.3 years ago by ▴ 60
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1.0k
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Comment: C: Customise blastn to exclude key words
4.2 years ago by ando.kelli ▴ 60
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1
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1.0k
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Comment: C: Customise blastn to exclude key words
4.2 years ago by ando.kelli ▴ 60
0
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1
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1.0k
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Comment: C: Customise blastn to exclude key words
4.2 years ago by ando.kelli ▴ 60
1
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7
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1.0k
views
Customise blastn to exclude key words
blast linux blastn ncbi
updated 4.2 years ago by 141k • written 4.2 years ago by ▴ 60
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0
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1.6k
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Comment: C: Indexing error with local blast
4.3 years ago by ando.kelli ▴ 60
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1
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1.6k
views
Comment: C: Indexing error with local blast
updated 4.3 years ago by 141k • written 4.3 years ago by ▴ 60
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0
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1.6k
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Comment: C: Indexing error with local blast
4.3 years ago by ando.kelli ▴ 60
4
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5
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1.6k
views
Indexing error with local blast
Annotation Blast database Linux RNA-Seq
updated 4.3 years ago by 141k • written 4.3 years ago by ▴ 60
1
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2
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3.8k
views
TMM.normalized.FPKM vs .TMM.EXPR.matrix for populating SQL
SQL EdgeR Trinity FPKM TPM
updated 5.6 years ago by • 0 • written 7.5 years ago by ▴ 60
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0
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4.4k
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Comment: C: Problem with Trinity's abundance_estimates_to_matrix.pl
6.2 years ago by ando.kelli ▴ 60
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0
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4.4k
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Answer: A: Problem with Trinity's abundance_estimates_to_matrix.pl
6.2 years ago by ando.kelli ▴ 60
0
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5
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4.4k
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Problem with Trinity's abundance_estimates_to_matrix.pl
Trinity RNA-Seq RSEM Matrix
6.2 years ago by ando.kelli ▴ 60
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1
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4.4k
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Comment: C: Problem with Trinity's abundance_estimates_to_matrix.pl
6.2 years ago by ando.kelli ▴ 60
1
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0
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50k
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Answer: C: Tool To Find Out If Fastq Is In Sanger Or Phred64 Encoding?
6.5 years ago by ando.kelli ▴ 60
0
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1
reply
1.4k
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Clustering with Trinity suite changes order of sample names
Trinity Clustering rna-seq DE
7.0 years ago by ando.kelli ▴ 60
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0
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1.4k
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Answer: A: Clustering with Trinity suite changes order of sample names
7.0 years ago by ando.kelli ▴ 60
1
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0
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2.0k
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Answer: A: When to start searchin for Postdoc?
7.3 years ago by ando.kelli ▴ 60
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0
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4.4k
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Comment: C: Calculate percentage mapped reads from Bowtie2/RSEM
7.3 years ago by ando.kelli ▴ 60
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0
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6.0k
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Comment: C: comparing two lists using command line tools
7.4 years ago by ando.kelli ▴ 60
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1
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6.0k
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Comment: C: comparing two lists using command line tools
7.4 years ago by ando.kelli ▴ 60
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0
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5.9k
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Comment: C: using IGV to visualize RNA seq alignment to transcriptome
7.4 years ago by ando.kelli ▴ 60
1
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0
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3.8k
views
Answer: A: TMM.normalized.FPKM vs .TMM.EXPR.matrix for populating SQL
7.5 years ago by ando.kelli ▴ 60
0
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1
reply
5.7k
views
Answer: A: Combine multiple fasta files in galaxy?
7.5 years ago by ando.kelli ▴ 60
2
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4
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5.7k
views
Combine multiple fasta files in galaxy?
fasta galaxy
updated 13 months ago by 43k • written 7.8 years ago by ▴ 60
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0
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1.8k
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Comment: C: EdgeR in Galaxy. Adjust C-value?
7.6 years ago by ando.kelli ▴ 60
2
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2
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1.8k
views
EdgeR in Galaxy. Adjust C-value?
Differential-gene-expression EdgeR Galaxy C-value
updated 13 days ago by 43k • written 7.6 years ago by ▴ 60
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