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Comment: Comment: How to download the complete database Nucleotide collection (nr/nt)?
2.7 years ago by ando.kelli ▴ 60
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1
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3.5k
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Comment: Comment: FASTA file split
2.7 years ago by ando.kelli ▴ 60
2
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1
reply
1.8k
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Using Trinity scripts with Singularity
transcriptomics Trinity Singularity
updated 2.8 years ago by 154k • written 2.8 years ago by ▴ 60
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3
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5.4k
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Calculate percentage mapped reads from Bowtie2/RSEM
RSEM Bowtie2 Mapped Reads resm-plot-model flagstat
updated 5.7 years ago by ▴ 940 • written 8.9 years ago by ▴ 60
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1.8k
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Comment: C: Customise blastn to exclude key words
5.7 years ago by ando.kelli ▴ 60
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1
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1.8k
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Comment: C: Customise blastn to exclude key words
5.7 years ago by ando.kelli ▴ 60
0
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1
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1.8k
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Comment: C: Customise blastn to exclude key words
5.7 years ago by ando.kelli ▴ 60
1
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7
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1.8k
views
Customise blastn to exclude key words
blast linux blastn ncbi
updated 5.7 years ago by 154k • written 5.7 years ago by ▴ 60
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0
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2.3k
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Comment: C: Indexing error with local blast
5.8 years ago by ando.kelli ▴ 60
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1
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2.3k
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Comment: C: Indexing error with local blast
updated 5.8 years ago by 154k • written 5.8 years ago by ▴ 60
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0
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2.3k
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Comment: C: Indexing error with local blast
5.8 years ago by ando.kelli ▴ 60
4
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5
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2.3k
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Indexing error with local blast
Annotation Blast database Linux RNA-Seq
updated 5.8 years ago by 154k • written 5.8 years ago by ▴ 60
1
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2
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4.4k
views
TMM.normalized.FPKM vs .TMM.EXPR.matrix for populating SQL
SQL EdgeR Trinity FPKM TPM
updated 7.1 years ago by • 0 • written 9.1 years ago by ▴ 60
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0
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5.5k
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Comment: C: Problem with Trinity's abundance_estimates_to_matrix.pl
7.7 years ago by ando.kelli ▴ 60
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0
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5.5k
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Answer: A: Problem with Trinity's abundance_estimates_to_matrix.pl
7.7 years ago by ando.kelli ▴ 60
0
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5
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5.5k
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Problem with Trinity's abundance_estimates_to_matrix.pl
Trinity RNA-Seq RSEM Matrix
7.7 years ago by ando.kelli ▴ 60
0
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1
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5.5k
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Comment: C: Problem with Trinity's abundance_estimates_to_matrix.pl
7.7 years ago by ando.kelli ▴ 60
1
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0
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55k
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Answer: C: Tool To Find Out If Fastq Is In Sanger Or Phred64 Encoding?
8.0 years ago by ando.kelli ▴ 60
0
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1
reply
1.8k
views
Clustering with Trinity suite changes order of sample names
Trinity Clustering rna-seq DE
8.5 years ago by ando.kelli ▴ 60
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0
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1.8k
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Answer: A: Clustering with Trinity suite changes order of sample names
8.5 years ago by ando.kelli ▴ 60
1
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0
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2.9k
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Answer: A: When to start searchin for Postdoc?
8.8 years ago by ando.kelli ▴ 60
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0
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5.4k
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Comment: C: Calculate percentage mapped reads from Bowtie2/RSEM
8.8 years ago by ando.kelli ▴ 60
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0
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7.7k
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Comment: C: comparing two lists using command line tools
8.9 years ago by ando.kelli ▴ 60
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1
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7.7k
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Comment: C: comparing two lists using command line tools
9.0 years ago by ando.kelli ▴ 60
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6.9k
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Comment: C: using IGV to visualize RNA seq alignment to transcriptome
9.0 years ago by ando.kelli ▴ 60
1
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0
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4.4k
views
Answer: A: TMM.normalized.FPKM vs .TMM.EXPR.matrix for populating SQL
9.0 years ago by ando.kelli ▴ 60
0
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1
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6.8k
views
Answer: A: Combine multiple fasta files in galaxy?
9.1 years ago by ando.kelli ▴ 60
2
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4
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6.8k
views
Combine multiple fasta files in galaxy?
fasta galaxy
updated 2.6 years ago by 45k • written 9.3 years ago by ▴ 60
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0
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2.2k
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Comment: C: EdgeR in Galaxy. Adjust C-value?
9.1 years ago by ando.kelli ▴ 60
2
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2
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2.2k
views
EdgeR in Galaxy. Adjust C-value?
Differential-gene-expression EdgeR Galaxy C-value
updated 18 months ago by 45k • written 9.1 years ago by ▴ 60
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