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7.4k
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Comment: C: TCGA Tumor matched Normal and Normal matched Tumor do not have the same number o
updated 5.9 years ago by 45k • written 10.6 years ago by ▴ 80
2
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4
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3.6k
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TCGA data set with both expression (rna seq/ microarray) and exome seq of same samples?
tcga cbioportal cgdsr
updated 7.9 years ago by 20 • written 9.1 years ago by ▴ 80
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1
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9.4k
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Comment: C: Amzon EC2 for bioinformatics, genomics, NGS analysis
8.1 years ago by cafelumiere12 ▴ 80
0
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1
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3.7k
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varscan v2.3.9 filter Parse exception
varscan
updated 8.4 years ago by • 0 • written 9.3 years ago by ▴ 80
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0
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3.6k
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Comment: C: TCGA data set with both expression (rna seq/ microarray) and exome seq of same
9.1 years ago by cafelumiere12 ▴ 80
0
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1
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4.4k
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CNV analysis using the ExomeDepth R Package
exomedepth r cnv
updated 3.2 years ago by 45k • written 9.7 years ago by ▴ 80
7
votes
6
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7.4k
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TCGA Tumor matched Normal and Normal matched Tumor do not have the same number of samples?
RNA-Seq TCGA
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 80
0
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0
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3.1k
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CNV analysis from SNP6.0 data using Affymetrix power tools
cnv apt-copynumber SNP affymetrix
updated 2.6 years ago by 45k • written 10.4 years ago by ▴ 80
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0
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4.2k
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Comment: C: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
10.6 years ago by cafelumiere12 ▴ 80
0
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1
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4.2k
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Comment: Comment: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 80
0
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0
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4.2k
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Comment: C: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
10.6 years ago by cafelumiere12 ▴ 80
3
votes
5
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4.2k
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Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
genefilter R RNA-Seq edgeR
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 80
0
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0
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14k
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Comment: C: Your Thoughts On A "Standard" Pipeline To Process Illumina 450K Data
10.6 years ago by cafelumiere12 ▴ 80
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0
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16k
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Comment: Comment: HTSeq-count high number of no_feature
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 80
0
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1
reply
16k
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Comment: Comment: HTSeq-count high number of no_feature
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 80
0
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0
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16k
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Comment: C: HTSeq-count high number of no_feature
10.6 years ago by cafelumiere12 ▴ 80
0
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1
reply
16k
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Comment: C: HTSeq-count high number of no_feature
10.6 years ago by cafelumiere12 ▴ 80
1
vote
8
replies
16k
views
HTSeq-count high number of no_feature
htseq-count rna-seq
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 80
5
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3
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7.9k
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Differential expression analysis for TCGA level 3 RNASeqV2 data?
RNA-Seq R edgeR
updated 4.5 years ago by 45k • written 10.9 years ago by ▴ 80
0
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1
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7.4k
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Comment: C: TCGA Tumor matched Normal and Normal matched Tumor do not have the same number o
10.9 years ago by cafelumiere12 ▴ 80
0
votes
1
reply
15k
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Comment: C: Do I need to normalize level 3 TCGA data?
10.9 years ago by cafelumiere12 ▴ 80
1
vote
1
reply
3.8k
views
Question About Htseq-Count
samtools rna-seq
updated 12.2 years ago by 105k • written 12.2 years ago by ▴ 80
22 results • Page 1 of 1
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