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6.2k
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Comment: C: TCGA Tumor matched Normal and Normal matched Tumor do not have the same number o
updated 4.4 years ago by 43k • written 9.2 years ago by ▴ 80
2
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4
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3.1k
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TCGA data set with both expression (rna seq/ microarray) and exome seq of same samples?
tcga cbioportal cgdsr
updated 6.4 years ago by 20 • written 7.7 years ago by ▴ 80
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7.5k
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Comment: C: Amzon EC2 for bioinformatics, genomics, NGS analysis
6.7 years ago by cafelumiere12 ▴ 80
0
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1
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3.3k
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varscan v2.3.9 filter Parse exception
varscan
updated 7.0 years ago by • 0 • written 7.9 years ago by ▴ 80
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0
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3.1k
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Comment: C: TCGA data set with both expression (rna seq/ microarray) and exome seq of same
7.7 years ago by cafelumiere12 ▴ 80
0
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1
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3.8k
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CNV analysis using the ExomeDepth R Package
exomedepth r cnv
updated 20 months ago by 43k • written 8.3 years ago by ▴ 80
7
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6
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6.2k
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TCGA Tumor matched Normal and Normal matched Tumor do not have the same number of samples?
RNA-Seq TCGA
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 80
0
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0
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2.9k
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CNV analysis from SNP6.0 data using Affymetrix power tools
cnv apt-copynumber SNP affymetrix
updated 14 months ago by 43k • written 8.9 years ago by ▴ 80
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0
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3.6k
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Comment: C: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
9.1 years ago by cafelumiere12 ▴ 80
0
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1
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3.6k
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Comment: Comment: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
updated 23 months ago by 43k • written 9.1 years ago by ▴ 80
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0
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3.6k
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Comment: C: Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
9.1 years ago by cafelumiere12 ▴ 80
3
votes
5
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3.6k
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Got fewer DE genes after applying bioconductor genefilter for edgeR analysis?
genefilter R RNA-Seq edgeR
updated 23 months ago by 43k • written 9.1 years ago by ▴ 80
0
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0
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12k
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Comment: C: Your Thoughts On A "Standard" Pipeline To Process Illumina 450K Data
9.2 years ago by cafelumiere12 ▴ 80
0
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0
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15k
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Comment: Comment: HTSeq-count high number of no_feature
updated 24 months ago by 43k • written 9.2 years ago by ▴ 80
0
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1
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15k
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Comment: Comment: HTSeq-count high number of no_feature
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 80
0
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0
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15k
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Comment: C: HTSeq-count high number of no_feature
9.2 years ago by cafelumiere12 ▴ 80
0
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1
reply
15k
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Comment: C: HTSeq-count high number of no_feature
9.2 years ago by cafelumiere12 ▴ 80
1
vote
8
replies
15k
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HTSeq-count high number of no_feature
htseq-count rna-seq
updated 24 months ago by 43k • written 9.2 years ago by ▴ 80
5
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3
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7.4k
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Differential expression analysis for TCGA level 3 RNASeqV2 data?
RNA-Seq R edgeR
updated 3.0 years ago by 43k • written 9.5 years ago by ▴ 80
0
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1
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6.2k
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Comment: C: TCGA Tumor matched Normal and Normal matched Tumor do not have the same number o
9.5 years ago by cafelumiere12 ▴ 80
0
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1
reply
13k
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Comment: C: Do I need to normalize level 3 TCGA data?
9.5 years ago by cafelumiere12 ▴ 80
1
vote
1
reply
3.6k
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Question About Htseq-Count
samtools rna-seq
updated 10.8 years ago by 104k • written 10.8 years ago by ▴ 80
22 results • Page 1 of 1
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