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0
votes
0
replies
502
views
Answer:
Answer: Align concatameric reads to region
2.1 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
981
views
Comment:
Comment: gtf2bed doesn't give gene_id in the bed file
2.1 years ago by
stolarek.ir
▴ 700
1
vote
1
reply
1.2k
views
Answer:
Answer: strand specific data
2.1 years ago by
stolarek.ir
▴ 700
2
votes
1
reply
8.1k
views
Answer:
A: Intersect multiple BED files
updated 4.8 years ago by
Ram
44k • written 8.7 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.6k
views
Comment:
C: How I can reduce the depth of a sequencing when I want to assemble it?
updated 4.8 years ago by
Ram
44k • written 8.8 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
5.1k
views
Comment:
C: Heatmap of Differentially Expressed Genes
updated 4.8 years ago by
Ram
44k • written 8.8 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
6.6k
views
Comment:
C: How to convert Affymetrix SNP IDs to dbSNP rs SNP names
updated 4.9 years ago by
Ram
44k • written 9.0 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
834
views
PacBio base modifications merging p6c2 and p4c2
PacBio
base modifications
updated 5.5 years ago by
richard.james.hall
▴ 20 • written 5.5 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
5.9k
views
Comment:
C: Merging files in plink
6.6 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.9k
views
Answer:
A: ABBA-BABA D statistics to pattern introgressed loci: applicable to RNA-seq data?
6.6 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
4.4k
views
Answer:
A: STAR analysis and alignment
6.7 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
3.2k
views
Comment:
C: Illumina paired end read header difference- SPAdes bwa run ERROR
7.0 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
3.3k
views
Comment:
C: RNASeq lane effect
7.0 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
5.0k
views
Comment:
C: long reads Pacbio SNP calling
7.1 years ago by
stolarek.ir
▴ 700
1
vote
1
reply
5.0k
views
Answer:
A: long reads Pacbio SNP calling
7.1 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
1.7k
views
codeml, output tree topology different from the input tree
codeml
paml
7.1 years ago by
stolarek.ir
▴ 700
2
votes
0
replies
12k
views
Comment:
C: Paired vs unpaired (DNA Sequencing)
7.2 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
2.3k
views
Comment:
C: How to align multiple genomic regions simultaneously
7.2 years ago by
stolarek.ir
▴ 700
2
votes
0
replies
4.7k
views
Answer:
A: PLINK RECODING ISSUE
7.2 years ago by
stolarek.ir
▴ 700
1
vote
1
reply
2.2k
views
Comment:
C: Ancestry Informative Markers
7.2 years ago by
stolarek.ir
▴ 700
2
votes
1
reply
2.2k
views
Comment:
C: Ancestry Informative Markers
7.2 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
1.9k
views
Comment:
C: Difference between PATRIC's WGS and COMPLETE genomes
7.2 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
4.3k
views
Comment:
C: bwa mem misaligns my contigs to the reference by a few bases
7.3 years ago by
stolarek.ir
▴ 700
1
vote
1
reply
4.3k
views
Comment:
C: bwa mem misaligns my contigs to the reference by a few bases
7.3 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
3.9k
views
Comment:
C: How to interpret genotypes with DP=1 for a vcf file
7.5 years ago by
stolarek.ir
▴ 700
2
votes
0
replies
2.3k
views
Comment:
C: How to understand likelihood ratio (LR) in GWAS?
7.5 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
1.8k
views
Comment:
C: Calculating LD between specific alleles even if they are not the minor alleles
7.5 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
9.5k
views
Comment:
C: Samtools consensus sequence
7.5 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
4.2k
views
Comment:
C: Different alignments rates with bwa mem (0%) and bowtie2 (82%)
7.6 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
7.5k
views
Comment:
C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.6 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
7.5k
views
Comment:
C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.6 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
7.5k
views
Comment:
C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.6 years ago by
stolarek.ir
▴ 700
1
vote
1
reply
7.5k
views
Comment:
C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.6 years ago by
stolarek.ir
▴ 700
2
votes
1
reply
7.5k
views
Answer:
C: Samtools: merge and mpileup vs mpileup alone for variant-calling with multiple B
7.6 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
1.8k
views
Comment:
C: Estimate signifiant loci in GWAS
7.6 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
2.4k
views
Comment:
C: Reproductivity of publicly available reads
7.6 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
6.9k
views
Comment:
C: How to "haploidize" diploid SNPs data in a vcf file
7.6 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
2.4k
views
Comment:
C: Reproductivity of publicly available reads
7.6 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.3k
views
Comment:
C: Converting .sam to .bam with samtools and I get a new error with every repeated
7.6 years ago by
stolarek.ir
▴ 700
2
votes
0
replies
2.4k
views
Comment:
C: Reproductivity of publicly available reads
7.6 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
1.7k
views
Comment:
C: Profile of methylation about the centromeres/telomeres of human
7.6 years ago by
stolarek.ir
▴ 700
0
votes
1
reply
5.7k
views
Comment:
C: Antisense transcription - how to detect it?
7.7 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.3k
views
Comment:
C: Conversion of genotype data: GEN format to matrix with genotypes encoded as 0, 1
7.7 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.2k
views
Comment:
C: How to do clustering of bacteria genome based on hamming distance.
7.7 years ago by
stolarek.ir
▴ 700
1
vote
1
reply
3.7k
views
Comment:
C: What's a good PacBio CLR read simulator?
7.7 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.9k
views
Comment:
C: plink PED file - randomly select allele at heterozygous site and convert to homo
7.8 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
2.9k
views
Comment:
C: plink PED file - randomly select allele at heterozygous site and convert to homo
7.8 years ago by
stolarek.ir
▴ 700
2
votes
3
replies
2.9k
views
plink PED file - randomly select allele at heterozygous site and convert to homozygous
aDNA
plink
PED
SNP
Genotype
updated 7.8 years ago by
zf1992lss
▴ 10 • written 8.7 years ago by
stolarek.ir
▴ 700
1
vote
0
replies
2.7k
views
Answer:
A: cd hit for removing sequence redundancy
7.8 years ago by
stolarek.ir
▴ 700
0
votes
0
replies
13k
views
Comment:
C: GC content calculation
7.8 years ago by
stolarek.ir
▴ 700
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