Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
9.9k
views
Answer: A: Ribo-seq Analysis software
updated 5.9 years ago by 45k • written 11.1 years ago by ★ 2.2k
0
votes
1
reply
6.3k
views
Comment: C: Calculating isoforms abundance using RNAseq data
updated 6.0 years ago by 45k • written 10.8 years ago by ★ 2.2k
0
votes
1
reply
6.3k
views
Answer: A: Calculating isoforms abundance using RNAseq data
updated 6.0 years ago by 45k • written 10.8 years ago by ★ 2.2k
1
vote
1
reply
5.4k
views
Answer: A: Publicly available Rna-Seq count data
updated 6.0 years ago by 45k • written 10.4 years ago by ★ 2.2k
1
vote
1
reply
10k
views
Comment: C: Cuffmerge running error
updated 6.0 years ago by 45k • written 11.0 years ago by ★ 2.2k
1
vote
1
reply
10k
views
Comment: C: Cuffmerge running error
updated 6.0 years ago by 45k • written 11.0 years ago by ★ 2.2k
1
vote
1
reply
10k
views
Comment: C: Cuffmerge running error
updated 6.0 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
votes
0
replies
2.7k
views
Answer: A: how to make cufflinks produce the nuclotide sequence of the gene + 5000 upstream
updated 6.1 years ago by 45k • written 10.6 years ago by ★ 2.2k
0
votes
2
replies
18k
views
Comment: C: Easiest way to compute RNA-Seq mapping stats (exons, introns, intergenic)?
updated 6.1 years ago by 45k • written 10.7 years ago by ★ 2.2k
2
votes
1
reply
18k
views
Answer: Answer: Easiest way to compute RNA-Seq mapping stats (exons, introns, intergenic)?
updated 3.5 years ago by 45k • written 10.7 years ago by ★ 2.2k
7
votes
0
replies
10k
views
Answer: A: How to check the bam file of read quality with graphically visual?
updated 6.1 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
votes
0
replies
6.1k
views
Comment: C: Convert A Psl File To A Sam File And Also Write Sequences To The Sam File?
updated 6.1 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
votes
0
replies
7.7k
views
Comment: C: Trinity works on my PC
updated 6.1 years ago by 45k • written 11.1 years ago by ★ 2.2k
0
votes
1
reply
33k
views
Comment: C: convert FASTA into FASTQ using linux
updated 6.9 years ago by 45k • written 11.0 years ago by ★ 2.2k
8
votes
4
replies
33k
views
Answer: A: convert FASTA into FASTQ using linux
updated 6.9 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
votes
0
replies
3.7k
views
Comment: C: Gene lists and calculated Ka/Ks ratio per gene
8.4 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
3.0k
views
Answer: A: retrieve genomic coordinate on mRNA
8.4 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
2.3k
views
Comment: C: Any tools to detect lncRNAs from RNA-seq data?
8.7 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
6.9k
views
Answer: A: Intersecting vcf files with bedtools
8.7 years ago by Manvendra Singh ★ 2.2k
1
vote
1
reply
3.2k
views
Answer: A: Statistical significance in phylogenies
8.7 years ago by Manvendra Singh ★ 2.2k
1
vote
1
reply
6.9k
views
Answer: A: STAR aligner fails to produce unmapped file
9.0 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
6.2k
views
Answer: A: getfasta command requires a bedfile template of some sort
updated 9.0 years ago by 154k • written 9.0 years ago by ★ 2.2k
0
votes
0
replies
3.0k
views
Answer: A: Metabolic gene database: The most-frequently mutated metabolic genes in human ca
9.0 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
2.0k
views
Answer: A: Non-coding RNA Atlas
9.0 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
4.4k
views
Comment: C: Overrepresented sequence in RNA-seq only in R2
9.0 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
4.8k
views
Answer: A: Ensembl transcript ID - BioMart retrieval
9.0 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
1.9k
views
Answer: A: Gene expression in populations
9.1 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
5.3k
views
Answer: A: Differential isoform expression analyses
9.1 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
3.6k
views
Answer: A: Identify the isoform of a transcript using RNA Seq data
9.2 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
6.3k
views
Comment: Comment: Comparing gene expression profiles between species
updated 3.6 years ago by 45k • written 9.2 years ago by ★ 2.2k
1
vote
0
replies
4.5k
views
Answer: A: Merging expression data from multiple platforms
9.2 years ago by Manvendra Singh ★ 2.2k
0
votes
2
replies
3.2k
views
Answer: A: Time series microarray data
9.2 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
8.3k
views
Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 2.2k
0
votes
0
replies
21k
views
Comment: C: GO analysis- analyze upregulated and downregulated genes separately?
10.2 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
3.7k
views
Why the resuming tophat2 command gives a strange error of samtools version?
RNA-Seq tophat2 mapping
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 2.2k
0
votes
1
reply
6.6k
views
Comment: Comment: Why is DESeq a better method for finding highly upregulated and downregulated ge
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 2.2k
0
votes
0
replies
6.6k
views
Comment: C: Why is DESeq a better method for finding highly upregulated and downregulated ge
10.3 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
6.6k
views
Comment: C: Why is DESeq a better method for finding highly upregulated and downregulated ge
10.3 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
5.6k
views
Comment: C: Differential expression analysis using Limma (Not on cel files)
10.4 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
4.3k
views
Comment: C: ChIP-Seq contaminated by human tissue?
10.4 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
2.3k
views
Answer: A: GFF model in Tophat and/or Cufflinks?
10.4 years ago by Manvendra Singh ★ 2.2k
2
votes
1
reply
10k
views
Answer: A: removing outliers from RNA-seq data
10.4 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
2.9k
views
Comment: C: Batch Retrieval of Coding Sequences
10.4 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
8.8k
views
Comment: C: Getting transcript annotation in BED format along with reference seq.
10.4 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
8.8k
views
Comment: Comment: Getting transcript annotation in BED format along with reference seq.
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 2.2k
1
vote
0
replies
3.7k
views
Comment: Comment: I need to know how to trimming RNAseq of GEO dataset.
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 2.2k
1
vote
1
reply
2.9k
views
Answer: Answer: Batch Retrieval of Coding Sequences
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 2.2k
1
vote
0
replies
3.4k
views
Comment: Comment: What is the best way to get help on Bioconductor packages?
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 2.2k
0
votes
1
reply
3.4k
views
Comment: C: What is the best way to get help on Bioconductor packages?
10.4 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
3.2k
views
Comment: Comment: Differentially expressed microRNA analysis using bowtie2-cufflink-cuffdiff
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 2.2k
374 results • Page 1 of 8
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6