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2
votes
1
reply
1.3k
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Answer:
Answer: Understanding 1/1 output in VCF
16 months ago by
karl.stamm
4.1k
0
votes
0
replies
1.0k
views
Comment:
Comment: What are the values shown on DESEQ2 heatmap legend?
20 months ago by
karl.stamm
4.1k
0
votes
1
reply
2.1k
views
Comment:
Comment: AF = 0.5 in chrX, VCF of a male
20 months ago by
karl.stamm
4.1k
1
vote
0
replies
731
views
Answer:
Answer: What are the data values in qRT-PCR for statistical testing? dCT? or 2^-dCT?
22 months ago by
karl.stamm
4.1k
0
votes
0
replies
623
views
Comment:
Comment: Why am I getting same linear regression lines for 'x' on 'y' and 'y' on 'x'?
23 months ago by
karl.stamm
4.1k
1
vote
1
reply
749
views
Comment:
Comment: PCA does not show distinction in groups
2.1 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.8k
views
Comment:
Comment: Non biology & computer professional interested in bioinformatics
2.5 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.8k
views
Answer:
Answer: Non biology & computer professional interested in bioinformatics
2.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
778
views
Answer:
Answer: RSQLite slowness
2.5 years ago by
karl.stamm
4.1k
0
votes
1
reply
870
views
Comment:
Comment: probability of two samples sharing a SNP by error
2.6 years ago by
karl.stamm
4.1k
1
vote
0
replies
5.3k
views
Answer:
Answer: Why does my t-test fail?
updated 2.6 years ago by
Ram
43k • written 2.6 years ago by
karl.stamm
4.1k
0
votes
1
reply
2.0k
views
Comment:
Comment: SNP Pruning Through PCA
2.7 years ago by
karl.stamm
4.1k
1
vote
0
replies
718
views
Comment:
Comment: Advise for a computational neophyte
2.7 years ago by
karl.stamm
4.1k
4
votes
1
reply
945
views
Answer:
Answer: RNA-seq for samples with RIN<3
2.7 years ago by
karl.stamm
4.1k
3
votes
0
replies
862
views
Answer:
Answer: How to select columns from a dataframe of which the name ends with a specific wo
2.8 years ago by
karl.stamm
4.1k
0
votes
0
replies
858
views
Comment:
C: On understanding the axis of a PCA plot
3.1 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.3k
views
Comment:
C: [RNA-seq] Extremely Unconsistent Raw Count from Different Tools; a dark mistery
3.1 years ago by
karl.stamm
4.1k
0
votes
0
replies
2.5k
views
Comment:
C: A question on the interpretation of a PCA plot
3.1 years ago by
karl.stamm
4.1k
0
votes
1
reply
931
views
Comment:
C: Very high ratio of cases to controls - how to increase statistical power?
3.2 years ago by
karl.stamm
4.1k
0
votes
1
reply
931
views
Comment:
C: Very high ratio of cases to controls - how to increase statistical power?
3.2 years ago by
karl.stamm
4.1k
0
votes
1
reply
798
views
Comment:
C: Problems with the same gene names in R, any help?
3.2 years ago by
karl.stamm
4.1k
0
votes
0
replies
4.8k
views
Comment:
C: PEPATAC error: ConnectionResetError: [Errno 104] Connection reset by peer
3.2 years ago by
karl.stamm
4.1k
0
votes
0
replies
6.7k
views
Comment:
C: How to handle duplicate row names in R
3.3 years ago by
karl.stamm
4.1k
0
votes
0
replies
892
views
Answer:
A: How to map reads onto human hg38 gene body regions instead of whole genome?
3.3 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.0k
views
Answer:
A: Loading Matrices of 10X Genomics failed
3.3 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.7k
views
Comment:
C: During RNA-seq analysis a lot of pseudogenes come up as DE
3.3 years ago by
karl.stamm
4.1k
1
vote
0
replies
3.8k
views
Comment:
C: What are the 5 biggest challenges/ opportunities in Bioinformatics going into 20
3.3 years ago by
karl.stamm
4.1k
0
votes
0
replies
2.4k
views
Comment:
C: Is there a tool to predict if a missense variant causes a loss of function on th
3.3 years ago by
karl.stamm
4.1k
0
votes
1
reply
2.5k
views
Comment:
C: A question on the interpretation of a PCA plot
3.3 years ago by
karl.stamm
4.1k
0
votes
0
replies
980
views
Comment:
C: Optimal Number of SNPs in NA12878 WES Data
3.3 years ago by
karl.stamm
4.1k
0
votes
1
reply
980
views
Comment:
C: Optimal Number of SNPs in NA12878 WES Data
3.4 years ago by
karl.stamm
4.1k
0
votes
1
reply
595
views
Comment:
C: Mapping transcriptomes against each other to find genetic differences
3.4 years ago by
karl.stamm
4.1k
1
vote
1
reply
2.2k
views
Answer:
A: Read depth maxing out at about 8000
3.4 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.4k
views
Comment:
C: Convert R script to python(implementation of the UPGMA OR neighbor joining algor
3.4 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.2k
views
Comment:
C: Transforming big file
3.4 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.2k
views
Comment:
C: Transforming big file
3.4 years ago by
karl.stamm
4.1k
1
vote
0
replies
1.3k
views
Answer:
A: Is there a way to map long fasta reads to short reference sequences?
3.4 years ago by
karl.stamm
4.1k
1
vote
0
replies
867
views
Comment:
C: Wes analysis - Quality control on sequenced data
3.4 years ago by
karl.stamm
4.1k
0
votes
1
reply
700
views
Comment:
C: What is the smallest number of cases you can have in a GWAS before interpretatio
3.4 years ago by
karl.stamm
4.1k
0
votes
1
reply
4.4k
views
Comment:
C: how do I find the genes which are common to and those which differ between multi
3.4 years ago by
karl.stamm
4.1k
0
votes
0
replies
3.4k
views
Comment:
C: Why is gnomAD AF vs gnomAD exome AF so different?
3.4 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.0k
views
Comment:
C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
3.5 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.9k
views
Comment:
C: Interpreting theta value
3.5 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.0k
views
Comment:
C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
3.5 years ago by
karl.stamm
4.1k
1
vote
1
reply
1.3k
views
Answer:
A: Multiple plots using for loops in R
3.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.2k
views
Comment:
C: Publicly Available RNA-Seq Datasets from Human Heart
3.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.0k
views
Comment:
C: Should we Ignore heterozygous SNPs while constructing SNP based phylogeny
3.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.1k
views
Answer:
A: How to a make schematic picture for RNA-seq steps
3.5 years ago by
karl.stamm
4.1k
1
vote
0
replies
1.1k
views
Answer:
A: Help understanding bcftools call genotyping decision
3.6 years ago by
karl.stamm
4.1k
0
votes
1
reply
977
views
Comment:
C: Genes inhibiting each other's expression
3.6 years ago by
karl.stamm
4.1k
508 results • Page
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