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Showing :
questions
6
votes
10
replies
1.4k
views
Is it possible to split BAM without sorting it?
samtools
BAM
bamtools
18 months ago by
tomas4482
▴ 390
0
votes
5
replies
939
views
Count expression of 10x scRNA-seq after UMI extraction
featureCount
subread
scRNA
umitools
20 months ago by
tomas4482
▴ 390
9
votes
18
replies
6.0k
views
6 follow
10x 3' library creates R1 and R2 fastq files with the same read length
10x
fastq
scRNA-seq
updated 8 months ago by
573704669
• 0 • written 21 months ago by
tomas4482
▴ 390
1
vote
0
replies
407
views
gene strand determined by flag in read1 and read2 should be intepreted differently?
samtools
RNA-seq
bam
updated 10 months ago by
Ram
43k • written 22 months ago by
tomas4482
▴ 390
1
vote
1
reply
627
views
Does anyone know how to use Human Splicing Finder?
prediction
splicing
finder
HSF
human
2.0 years ago by
tomas4482
▴ 390
2
votes
2
replies
466
views
How to concatenate samtools output into one single file?
samtools
updated 10 months ago by
Ram
43k • written 2.0 years ago by
tomas4482
▴ 390
1
vote
0
replies
387
views
Single exon has two distinct PSI in TCGA SpliceSeq.
SpliceSeq
alternative
splicing
skipping
exon
2.1 years ago by
tomas4482
▴ 390
1
vote
2
replies
763
views
integrated scRNA-seq dataset
scRNA-seq
updated 2.4 years ago by
Friederike
8.9k • written 2.4 years ago by
tomas4482
▴ 390
0
votes
3
replies
736
views
GC/AT base content crossed at the tail of read
DNA
sequence
WGS
WES
updated 2.4 years ago by
GenoMax
141k • written 2.4 years ago by
tomas4482
▴ 390
1
vote
7
replies
2.4k
views
featureCounts has low successfully assigned reads
RNA-seq
featureCounts
updated 9 months ago by
Juan Pablo
• 0 • written 2.5 years ago by
tomas4482
▴ 390
1
vote
7
replies
3.7k
views
6 follow
Aspera: Failed to authenticate
ENA
aspera
2.5 years ago by
tomas4482
▴ 390
0
votes
1
reply
670
views
Search predicted peptides from proteomes
peptide
proteome
search
updated 2.5 years ago by
progistar
▴ 40 • written 2.6 years ago by
tomas4482
▴ 390
4
votes
4
replies
1.5k
views
SRA/ENA library layout is inconsistent with the data source
ENA
fastq
illumina
SRA
2.6 years ago by
tomas4482
▴ 390
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