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Comment: C: PLINK 1.9 make-bed only produces '-temporary' files with no explanatory error me
5.4 years ago by chrchang523 11k
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2
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4.6k
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Comment: C: PLINK 1.9 make-bed only produces '-temporary' files with no explanatory error me
5.4 years ago by chrchang523 11k
2
votes
1
reply
4.6k
views
Answer: C: PLINK 1.9 make-bed only produces '-temporary' files with no explanatory error me
5.4 years ago by chrchang523 11k
1
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0
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3.2k
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Answer: A: Calculating genetic distance from VCF to MAP format
5.4 years ago by chrchang523 11k
1
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0
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3.8k
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Answer: A: Confidence Intervals For Ors Interaction In Plink Epistasis Analysis
updated 5.4 years ago by 12k • written 5.4 years ago by 11k
1
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1
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955
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Answer: A: simple question about insertion standards in vcf 4.2
5.4 years ago by chrchang523 11k
2
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1
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3.6k
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Answer: A: PLINK - Sample(s) present with no genotype data
5.4 years ago by chrchang523 11k
0
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0
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2.0k
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Answer: A: R SNPRelate and PLINK PCA eigenvectors negatives of each other
5.4 years ago by chrchang523 11k
2
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0
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2.7k
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Comment: C: How to use plink to consolidate multiple single-sample vcf files?
5.5 years ago by chrchang523 11k
3
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1
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2.7k
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Answer: A: How to use plink to consolidate multiple single-sample vcf files?
5.5 years ago by chrchang523 11k
2
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1
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3.2k
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Answer: A: PLINK unable to read covariate file
5.5 years ago by chrchang523 11k
0
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1
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2.4k
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Comment: C: hello everyone; How I can convert plink raw file (recodeA; 0, 1, 2) to AlleleAC
5.5 years ago by chrchang523 11k
1
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1
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1.2k
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Answer: A: Merge data set in Plink based on the number of SNPs of the largest
5.5 years ago by chrchang523 11k
4
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2
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15k
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Answer: C: PI_HAT and Z-values for relationships (PLINK IBD calculation)
updated 5.5 years ago by 45k • written 7.7 years ago by 11k
2
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2
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1.3k
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Answer: A: Dominance effect SNP estimate
5.5 years ago by chrchang523 11k
1
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2
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1.5k
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Answer: A: Does it have something wrong with my Linkage Disequilibrium scatterplot?
5.5 years ago by chrchang523 11k
0
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0
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901
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Comment: C: How to save SNPs removed by quality control? Plink
5.5 years ago by chrchang523 11k
0
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0
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5.7k
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Comment: C: Bcftools unsorted positions?
5.6 years ago by chrchang523 11k
0
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1
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5.7k
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Comment: C: Bcftools unsorted positions?
5.6 years ago by chrchang523 11k
0
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0
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1.0k
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Answer: A: Inconsistent bim files after plink plain text format converting
5.6 years ago by chrchang523 11k
4
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0
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6.1k
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Answer: A: how to estimate heterozygosity by sample from a multi-sample vcf file
5.6 years ago by chrchang523 11k
1
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0
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3.2k
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Answer: A: Plink --freq function
updated 5.6 years ago by 12k • written 5.6 years ago by 11k
1
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0
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3.2k
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Comment: C: Plink --freq function
5.6 years ago by chrchang523 11k
1
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0
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4.9k
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Answer: A: plink2 extract subset of samples from .bgen file
5.6 years ago by chrchang523 11k
2
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0
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1.5k
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Answer: A: ld-pruning to a specific number of SNPs
5.6 years ago by chrchang523 11k
1
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0
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3.7k
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Comment: C: How to read a ".ld.bin" file produced by PLINK
5.6 years ago by chrchang523 11k
0
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0
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1.6k
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Answer: A: Tool to check what alternate allele is dominant across samples per line of the V
5.6 years ago by chrchang523 11k
0
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1
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5.7k
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Comment: C: update-chr issues with PLINK 1.9
5.6 years ago by chrchang523 11k
0
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0
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18k
views
Comment: Comment: how to count variants par sample per chromosome in a vcf file?
updated 4.4 years ago by 45k • written 5.6 years ago by 11k
1
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1
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5.7k
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Answer: A: update-chr issues with PLINK 1.9
5.6 years ago by chrchang523 11k
0
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0
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2.2k
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Comment: C: Plink Error in PCA plot
5.6 years ago by chrchang523 11k
0
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0
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2.2k
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Comment: C: Plink Error in PCA plot
5.6 years ago by chrchang523 11k
1
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0
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1.4k
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Answer: A: how to use plink to get all the SNP LD score > 0.8 in matrix format?
5.6 years ago by chrchang523 11k
2
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0
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1.3k
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Answer: A: OR in plink2 GLM
5.6 years ago by chrchang523 11k
0
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0
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1.9k
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Comment: C: Relatedness inference using KING
5.6 years ago by chrchang523 11k
0
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1
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1.3k
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Answer: A: A2 different between PLINK .bim file and .frq file?
5.6 years ago by chrchang523 11k
0
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0
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1.5k
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Answer: A: GxE intreactions in PLINK
5.6 years ago by chrchang523 11k
0
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1
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9.0k
views
Comment: C: PLINK --allow-extra-chr error
5.6 years ago by chrchang523 11k
1
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1
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1.1k
views
Answer: A: Logistic regression by allelic model in plink2
5.6 years ago by chrchang523 11k
0
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0
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9.0k
views
Comment: C: PLINK --allow-extra-chr error
5.6 years ago by chrchang523 11k
1
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1
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9.0k
views
Comment: C: PLINK --allow-extra-chr error
5.6 years ago by chrchang523 11k
2
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1
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9.0k
views
Comment: C: PLINK --allow-extra-chr error
5.6 years ago by chrchang523 11k
0
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1
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9.0k
views
Comment: C: PLINK --allow-extra-chr error
5.6 years ago by chrchang523 11k
0
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0
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2.1k
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Comment: C: PLINK input files from Genome Studio
5.7 years ago by chrchang523 11k
2
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0
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9.1k
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Comment: C: Some 'NA's in plink logistic regression results
updated 5.7 years ago by 45k • written 11.3 years ago by 11k
1
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0
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3.1k
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Answer: A: plink/GCTA: How to remove multiple SNPs and a range around them
5.7 years ago by chrchang523 11k
0
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0
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2.4k
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Comment: C: How to merge 23andme samples in Plink? Each .ped/.map file represent a sample.
5.7 years ago by chrchang523 11k
1
vote
0
replies
3.3k
views
Answer: A: Problem with the plink output file for adjusted Bonferroni test
updated 5.7 years ago by 45k • written 11.3 years ago by 11k
0
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1
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5.1k
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Comment: C: Help needed parsing VCF files
updated 5.7 years ago by 45k • written 11.3 years ago by 11k
0
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0
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4.7k
views
Answer: A: Missing genotypes, in case control study using Plink
updated 5.7 years ago by 45k • written 11.3 years ago by 11k
914 results • Page 8 of 19
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