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questions
1
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0
replies
449
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Significance of "KEGG root term"
analysis
ORA
KEGG
pathway
17 months ago by
Barista
▴ 40
3
votes
3
replies
2.0k
views
Filtering lowly expressed genes
Genes
Filtering
Lowly
Expressed
RNAseq
updated 2.0 years ago by
Gordon Smyth
★ 7.0k • written 2.7 years ago by
Barista
▴ 40
0
votes
3
replies
1.0k
views
CDSeq for deconvolution of whole blood RNAseq, any experience?
RNAseq
Deconvolution
updated 15 months ago by
FrankStarling
▴ 50 • written 2.5 years ago by
Barista
▴ 40
1
vote
0
replies
407
views
Recommended bioinformatic course?
Course
2.4 years ago by
Barista
▴ 40
9
votes
14
replies
3.3k
views
Which covariates and factors to include in model matrix
Model
EdgeR
matrix
design
2.5 years ago by
Barista
▴ 40
0
votes
3
replies
755
views
Correcting for leukocyt count in QuantSeq analysis
QuantSeq
2.5 years ago by
Barista
▴ 40
6
votes
6
replies
2.9k
views
Exclude pseudogenes and lncRNA's from DE-analysis?
lncRNAs
Quantseq
updated 2.0 years ago by
Gordon Smyth
★ 7.0k • written 2.6 years ago by
Barista
▴ 40
0
votes
0
replies
471
views
RQN value for Quantseq experiment
RIN
Quantseq
RQN
2.6 years ago by
Barista
▴ 40
3
votes
4
replies
2.3k
views
How can we compare EdgeR to limma-voom?
limma-voom
EdgeR
updated 2.6 years ago by
bigomics.team
▴ 90 • written 2.6 years ago by
Barista
▴ 40
2
votes
3
replies
1.0k
views
Use Spike-Ins or TMM-normalization
normalization
edgeR
updated 13 months ago by
Ram
43k • written 2.7 years ago by
Barista
▴ 40
1
vote
3
replies
975
views
MD plot for every sample (?!)
MD-plot
EdgeR
2.7 years ago by
Barista
▴ 40
5
votes
3
replies
992
views
My bioinformatics story
QuantSeq
DE
EdgeR
updated 2.7 years ago by
Ram
43k • written 2.7 years ago by
Barista
▴ 40
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