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1
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3
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752
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Filtering VCF files based on VAF giving incorrect results
GATK
picard
VCF
bcftools
updated 6 months ago by
Pierre Lindenbaum
164k • written 6 months ago by
Arton
▴ 20
0
votes
1
reply
562
views
Comment:
Comment: Allele count of 2 for homoplasmic MT variants in VCF
6 months ago by
Arton
▴ 20
2
votes
4
replies
562
views
Allele count of 2 for homoplasmic MT variants in VCF
Variant-Calling
GATK
VCF
6 months ago by
Arton
▴ 20
0
votes
1
reply
752
views
Comment:
Comment: Filtering VCF files based on VAF giving incorrect results
6 months ago by
Arton
▴ 20
0
votes
1
reply
984
views
Comment:
Comment: Using VEP annotation output as the input for a second VEP annotation
6 months ago by
Arton
▴ 20
1
vote
0
replies
2.4k
views
Comment:
Comment: How to calculate coverage of Nanopore long read data?
6 months ago by
Arton
▴ 20
0
votes
1
reply
561
views
Comment:
Comment: I can't add VAF from population for all of my variants from VCF file
8 months ago by
Arton
▴ 20
0
votes
0
replies
244
views
Analyzing differentially methylated regions from Nanopore long read data?
Long-read-sequencing
methylation
updated 8 months ago by
Ram
44k • written 8 months ago by
Arton
▴ 20
0
votes
0
replies
502
views
Answer:
Answer: NanoPlot quality data
8 months ago by
Arton
▴ 20
0
votes
1
reply
946
views
Comment:
Comment: index fasta file for HaplotypeCaller
9 months ago by
Arton
▴ 20
0
votes
1
reply
946
views
Answer:
Answer: index fasta file for HaplotypeCaller
9 months ago by
Arton
▴ 20
0
votes
0
replies
624
views
Comment:
Comment: How to merge VCF files from multiple samples and remove individual level informa
9 months ago by
Arton
▴ 20
0
votes
0
replies
624
views
Comment:
Comment: How to merge VCF files from multiple samples and remove individual level informa
9 months ago by
Arton
▴ 20
3
votes
4
replies
624
views
How to merge VCF files from multiple samples and remove individual level information
VCF
9 months ago by
Arton
▴ 20
0
votes
1
reply
2.4k
views
Comment:
Comment: How to calculate coverage of Nanopore long read data?
10 months ago by
Arton
▴ 20
0
votes
1
reply
984
views
Comment:
Comment: Using VEP annotation output as the input for a second VEP annotation
10 months ago by
Arton
▴ 20
0
votes
1
reply
984
views
Comment:
Comment: Using VEP annotation output as the input for a second VEP annotation
10 months ago by
Arton
▴ 20
0
votes
1
reply
984
views
Comment:
Comment: Using VEP annotation output as the input for a second VEP annotation
updated 10 months ago by
Ram
44k • written 10 months ago by
Arton
▴ 20
1
vote
9
replies
984
views
Using VEP annotation output as the input for a second VEP annotation
Annotation
VEP
VCF
6 months ago by
Arton
▴ 20
0
votes
0
replies
2.4k
views
Comment:
Comment: How to calculate coverage of Nanopore long read data?
23 months ago by
Arton
▴ 20
6
votes
5
replies
2.4k
views
How to calculate coverage of Nanopore long read data?
sequencing
coverage
updated 3 months ago by
cmdcolin
★ 4.0k • written 23 months ago by
Arton
▴ 20
0
votes
1
reply
1.1k
views
Comment:
Comment: NCBI reported coverage from long and short reads
23 months ago by
Arton
▴ 20
0
votes
0
replies
7.0k
views
Answer:
Answer: bait interval list for picard collecthsmetrices
24 months ago by
Arton
▴ 20
0
votes
0
replies
533
views
Custom allele frequency file for Merlin
pLINK
Merlin
Linkage
3.0 years ago by
Arton
▴ 20
0
votes
1
reply
4.4k
views
Comment:
Comment: Where To Get The Genetic Map For The Haplotype Reference Consortium to phase the
3.0 years ago by
Arton
▴ 20
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