Question: How to detect rRNA from reads ?
1
gravatar for prpadi
5.0 years ago by
prpadi10
Germany
prpadi10 wrote:

Hi all,

I have sequenced many RNA and I would like to identify all the ribosomal RNA, or a maximum of all of them. Which software could I used to detect these rRNA ?

Thank you for your help.

sequencing rna-seq next-gen • 2.0k views
ADD COMMENTlink modified 5.0 years ago • written 5.0 years ago by prpadi10

What organism are you studying?

ADD REPLYlink written 5.0 years ago by Jason880

Mainly sequences from Anopheles

ADD REPLYlink written 5.0 years ago by prpadi10
1
gravatar for cts
5.0 years ago by
cts1.6k
Pasadena
cts1.6k wrote:

I've used SortMeRNA with good effect before. 

ADD COMMENTlink written 5.0 years ago by cts1.6k
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