Convert FPKM value to FPK value
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9.9 years ago
mike ▴ 90

Hello,

Lets say I have gene_exp.diff file with comparison of two conditions (each condition has 3 replicates). How can I convert FPKM value in gene_exp.diff file to FPK value?

Thanks

cuffdiff RNA-Seq • 2.4k views
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9.9 years ago
Multipy by one million.
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Why shall I multiply it by one million? Please give me an explanation

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The M stands for million in FPKM. So, it's fragments per million reads. To get FPK, you multiply by 1,000,000

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