where can I download hs37m.fa.gz?
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7.6 years ago
zhangz.cs ▴ 280

Could anyone please tell me where I can download the human reference genome hs37m.fa.gz? Thanks a lot!

Cheers,
Zhen

genome • 1.8k views
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7.6 years ago
Denise CS ★ 5.2k

I wonder what the m stands for? Masked sequence? This is the previous assembly of the human genome aka GRCh37. You can download it from the Ensembl FTP GRCh37 site. Both masked and unsmasked fasta files can be found here. It might be worth checking the README for more details on the files themselves.

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I got the information about the file from http://lh3lh3.users.sourceforge.net/alnROC.shtml. I don't know what the m stands for either.

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