I was searching for some tool or some particular data set that can help me to download gene pairs along with their orientations and distances between them. for example
Column1 Column2 Column3 Column4 Gene1 Gene2 orientation distance_between_two
or some algorithm to do so. I have set of genes and their orientations, like
Gene1 orientation Gene2 Orientation Gene3 Orientation
ans so on.
I kind of need an adjacency matrix for orientations of the genes in the datasets. Any ideas???