Forum:DNA sequencing on Apache hadoop

Question

[sibel.bigdata]

Hi;

I am big data developer, and I developed a sw which running on hadoop, amazon emr. machine learning and apache spark. Now I am just doing dna sequencing. I need real bioinformatic problem, I am asking everybody, if you need run your big file, please connect me. I can run it on my sw

You can connect me from [e-mail]

Regards\

Sbel

[karl.stamm]

You haven't said what your software does.

[sibel.bigdata]

Hi Karl;

I will open it public, and give link everyone, then I will write much more detail. Now I need real bioinformatic problem to analysis it on my sw. Can you tell me real problem, which difficult to analysis data on traditional way (I mean without using hadoop, spark. or high node cluster, or machine learning)

Thank you
Sibel

[Ram]

Pretty sure compute power is not as much of a concern as data security to most of us here :)

[Devon Ryan]

And then there's the "getting the data to the cloud" issue. It's often faster to just send hard drives...

[Devon Ryan]

FYI, clusters and machine learning are pretty much the "traditional ways" these days...