fastPHASE output format to PLINK input format

Question

[kumar.vinod81]

I've converted PLINK (PED & MAP) files to fastPHASE input format (--recode-structure) for imputation. After imputation, I want to convert fastPHASE output file back to PLINK input format but I am not able to do this. I've asked the same question here previously but didn't get any good answer.

Please help.

[Kevin Blighe]

Take a look at previous answers / comments, here:

• Fastphase To Plink Format
• https://groups.google.com/forum/#!topic/plink2-users/HM-uIGkHu9w