Here there are two list of genes. One is a set of genes (about 500 genes), the other is all the genes (about 20k). And each gene has a number meaning the number of genes interacted with it. To compare whether or not they are different concerning the number of interacted genes, which kind of test should be used? Thank you.
A = c(4, 5, 40, 3, 0, 0) #length(A)=500 B = c(1,2,0,0,0,43,65,...) #length(B)=20000
Genes from A are also from B.
Yes, there are biases in interactome data, esp. lots of 0s. Any other test which could be used? Thank you.
Did it not work?
It should work.
Yes, it works. Thank you.